Os01g0516200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dimeric alpha-beta barrel domain containing protein.
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Os01g0516200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dimeric alpha-beta barrel domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.88 | 0.508 | 7.93 | -1.71 | 0.638 | -2.41 | -0.906 | 0.104 | 0.58 | 21.8 | 20.8 | 1627 | -- | -- |
| 116.89 | 0.504 | 7.93 | -1.74 | 0.634 | -2.41 | -0.896 | -- | 0.574 | 21.8 | 20.78 | 1627 | -- | -- |
| 119.85 | 0.51 | 7.94 | -1.77 | 0.631 | -2.36 | -- | 0.0115 | 0.556 | 22.3 | 20.8 | 1570 | -- | -- |
| 118.82 | 0.508 | 7.94 | -1.7 | 0.91 | -2.5 | -- | -- | 0.579 | 22 | 21 | 2172 | -- | -- |
| 143.47 | 0.558 | 7.91 | -1.68 | -- | -2.36 | -- | 0.1 | 0.572 | -- | 20.7 | 1561 | -- | -- |
| 298.08 | 0.809 | 8.06 | -2.62 | 0.563 | -- | -0.909 | -- | 0.00938 | 21.9 | -- | -- | -- | -- |
| 301.2 | 0.813 | 8.06 | -2.59 | 0.566 | -- | -- | -- | 0.0102 | 22.1 | -- | -- | -- | -- |
| 143.46 | 0.558 | 7.92 | -1.71 | -- | -2.34 | -- | -- | 0.567 | -- | 20.7 | 1559 | -- | -- |
| 149.59 | 0.57 | 7.84 | -- | 0.638 | -3.26 | -- | -- | 0.958 | 21.7 | 17 | 6116 | -- | -- |
| 320.56 | 0.837 | 8.04 | -2.58 | -- | -- | -- | -- | 0.0111 | -- | -- | -- | -- | -- |
| 478.11 | 1.02 | 7.99 | -- | 0.556 | -- | -- | -- | 0.299 | 21.8 | -- | -- | -- | -- |
| 169.57 | 0.606 | 7.8 | -- | -- | -3.28 | -- | -- | 1.11 | -- | 16.7 | 7345 | -- | -- |
| 496.57 | 1.04 | 7.98 | -- | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.25 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 4 | 115.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 49 | 116.85 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 184 | 118.80 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 199 | 118.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 211 | 119.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 220 | 119.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 242 | 119.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 248 | 119.48 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 251 | 119.49 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 7 |
| 255 | 119.52 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 285 | 119.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 420 | 120.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 440 | 120.78 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 15 |
| 442 | 120.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 474 | 120.98 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 556 | 121.45 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 793 | 123.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |