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Os01g0513100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0139) R2 : 0.444
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.586 (0.0335) R2dC : 0.373 R2C : 0.361
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.211 (0.0292) R2dN8 : 0.0827 R2N8 : 0.0701
σ : 0.262
deviance : 31.25
__
_____
C
peak time of C : 1.62
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.52 0.228 11.3 0.426 0.279 0.42 -0.152 0.353 0.266 3.6 31.79 12 -- --
23.86 0.227 11.3 0.419 0.298 0.394 0.14 -- 0.267 3.04 34.09 12 -- --
23.57 0.226 11.3 0.426 0.287 0.411 -- 0.289 0.269 3.34 33.52 13 -- --
23.91 0.228 11.3 0.415 0.288 0.415 -- -- 0.266 3.35 33.73 12 -- --
24.9 0.232 11.3 0.442 -- 0.584 -- 0.291 0.293 -- 26.85 140 -- --
26.73 0.242 11.3 0.409 0.578 -- 0.282 -- 0.258 1.53 -- -- -- --
27.05 0.244 11.3 0.399 0.578 -- -- -- 0.256 1.6 -- -- -- --
25.24 0.234 11.3 0.438 -- 0.581 -- -- 0.294 -- 26.11 139 -- --
28.5 0.249 11.3 -- 0.313 0.396 -- -- 0.226 3.18 33.73 15 -- --
47.49 0.322 11.3 0.423 -- -- -- -- 0.269 -- -- -- -- --
31.25 0.262 11.3 -- 0.586 -- -- -- 0.211 1.62 -- -- -- --
30.27 0.256 11.3 -- -- 0.572 -- -- 0.245 -- 25.66 128 -- --
52.21 0.337 11.3 -- -- -- -- -- 0.222 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.03 atmosphere 1000.0 10 > th dose independent rect. 17 6
5 21.57 wind 7.0 270 < th dose independent rect. 19 20
6 21.58 atmosphere 995.0 270 > th dose independent rect. 15 4
7 21.59 wind 7.0 270 < th dose independent rect. 21 17
13 21.74 wind 7.0 10 < th dose independent rect. 23 18
14 21.78 atmosphere 995.0 270 > th dose independent rect. 14 7
15 21.80 temperature 20.0 270 > th dose independent rect. 15 5
16 21.81 temperature 20.0 270 > th dose independent rect. 14 7
17 21.83 radiation 40.0 270 < th dose dependent rect. 15 4
19 21.85 wind 1.0 10 > th dose independent rect. 17 6
21 21.86 precipitation 0.1 270 < th dose independent rect. 10 15
23 21.86 precipitation 0.1 270 < th dose dependent rect. 10 15
27 21.88 radiation 20.0 270 < th dose independent rect. 15 4
31 21.92 precipitation 0.1 270 < th dose independent rect. 19 20
32 21.92 precipitation 0.1 270 < th dose dependent rect. 19 20
34 21.94 radiation 30.0 10 < th dose dependent rect. 11 12
43 21.99 radiation 30.0 10 < th dose dependent rect. 7 16
44 22.00 atmosphere 1000.0 10 > th dose independent rect. 17 17
45 22.01 atmosphere 1000.0 270 > th dose independent rect. 17 1
48 22.02 atmosphere 1015.0 270 < th dose independent rect. 14 7
51 22.03 atmosphere 995.0 10 > th dose independent rect. 23 18
52 22.03 atmosphere 1000.0 30 > th dose independent rect. 2 21
53 22.04 temperature 10.0 10 > th dose independent rect. 17 6
56 22.04 atmosphere 1010.0 10 < th dose independent rect. 17 6
58 22.04 radiation 20.0 10 < th dose independent rect. 17 6
61 22.04 temperature 10.0 10 > th dose independent rect. 23 18
63 22.05 wind 7.0 270 < th dose independent rect. 15 4
65 22.05 atmosphere 1000.0 90 > th dose independent rect. 17 16
66 22.05 atmosphere 1000.0 10 > th dose independent rect. 4 19
68 22.05 wind 9.0 270 < th dose dependent rect. 15 4
73 22.06 atmosphere 995.0 10 > th dose dependent rect. 17 6
74 22.06 radiation 40.0 10 < th dose dependent rect. 17 6
77 22.07 precipitation 0.1 10 < th dose independent rect. 23 18
79 22.07 precipitation 0.1 10 < th dose dependent rect. 23 18
86 22.09 temperature 10.0 270 > th dose independent rect. 15 4
88 22.09 atmosphere 1010.0 270 < th dose independent rect. 15 4
91 22.09 wind 1.0 90 > th dose independent rect. 16 7
92 22.09 temperature 10.0 270 > th dose independent rect. 19 20
97 22.10 temperature 10.0 270 > th dose dependent rect. 7 8
102 22.11 atmosphere 1015.0 90 < th dose independent rect. 16 7
104 22.12 wind 9.0 10 < th dose independent rect. 17 6
107 22.12 radiation 40.0 90 < th dose dependent rect. 15 8
120 22.15 precipitation 0.1 270 < th dose independent rect. 21 17
125 22.15 precipitation 0.1 270 < th dose dependent rect. 21 17
137 22.18 radiation 40.0 270 < th dose independent rect. 14 7
139 22.19 wind 1.0 270 > th dose independent rect. 15 5
142 22.19 wind 9.0 270 < th dose independent rect. 10 15
143 22.19 temperature 10.0 270 > th dose independent rect. 21 17
144 22.19 atmosphere 995.0 270 > th dose independent rect. 21 17
146 22.19 atmosphere 995.0 270 > th dose independent rect. 19 20
178 22.24 wind 1.0 270 > th dose independent rect. 14 7
179 22.24 temperature 20.0 90 > th dose independent rect. 17 16
197 22.28 wind 9.0 270 < th dose independent rect. 14 7
202 22.28 radiation 30.0 10 < th dose dependent rect. 4 19
233 22.32 radiation 40.0 270 < th dose independent rect. 2 17
238 22.32 radiation 40.0 90 < th dose dependent rect. 16 19
242 22.33 precipitation 0.1 10 < th dose independent rect. 17 6
245 22.33 precipitation 0.1 10 < th dose dependent rect. 17 6
256 22.35 wind 9.0 270 < th dose independent rect. 18 23
262 22.37 humidity 50.0 270 > th dose independent rect. 21 17
263 22.37 atmosphere 995.0 270 > th dose dependent rect. 16 3
277 22.39 radiation 40.0 270 < th dose dependent rect. 2 17
279 22.39 temperature 10.0 10 > th dose dependent rect. 23 18
282 22.40 radiation 40.0 270 < th dose independent rect. 1 19
284 22.40 radiation 40.0 10 < th dose dependent rect. 17 17
285 22.40 radiation 30.0 10 < th dose dependent rect. 17 19
306 22.42 temperature 15.0 270 > th dose independent rect. 1 9
308 22.42 radiation 30.0 30 < th dose dependent sin 19 NA
312 22.43 atmosphere 995.0 270 > th dose independent rect. 15 16
314 22.43 radiation 20.0 270 < th dose independent rect. 1 18
316 22.43 humidity 50.0 270 > th dose independent rect. 20 19
337 22.45 wind 9.0 270 < th dose independent rect. 1 9
349 22.46 atmosphere 995.0 270 > th dose independent rect. 1 9
350 22.46 atmosphere 1015.0 270 < th dose independent rect. 1 9
351 22.46 temperature 10.0 270 > th dose independent rect. 10 15
358 22.47 humidity 50.0 270 > th dose independent rect. 1 9
364 22.47 radiation 40.0 270 < th dose independent rect. 24 21
366 22.47 wind 9.0 270 < th dose dependent rect. 14 6
371 22.48 temperature 30.0 270 < th dose independent rect. 1 9
377 22.49 temperature 20.0 270 > th dose independent rect. 17 1
398 22.50 wind 9.0 90 < th dose independent rect. 9 8
409 22.51 atmosphere 1015.0 90 < th dose independent rect. 17 16
449 22.54 precipitation 0.1 270 < th dose independent rect. 1 9
456 22.54 precipitation 0.1 270 < th dose dependent rect. 1 9
470 22.55 temperature 10.0 90 > th dose dependent rect. 9 8
484 22.57 radiation 40.0 270 < th dose independent rect. 1 9
525 22.59 temperature 10.0 10 > th dose dependent rect. 9 8
537 22.60 temperature 10.0 1440 > th dose independent rect. 17 7
540 22.60 radiation 30.0 1440 < th dose independent rect. 17 7
548 22.60 temperature 10.0 1440 > th dose independent rect. 24 17
561 22.61 precipitation 0.1 270 < th dose independent rect. 15 4
562 22.61 humidity 50.0 30 > th dose independent rect. 17 6
564 22.61 radiation 20.0 10 < th dose independent rect. 10 13
567 22.61 humidity 50.0 30 > th dose independent rect. 23 18
573 22.61 precipitation 0.1 270 < th dose dependent rect. 15 4
580 22.61 temperature 10.0 90 > th dose dependent rect. 17 16
588 22.62 precipitation 0.1 90 < th dose independent rect. 9 8
597 22.62 precipitation 0.1 90 < th dose dependent rect. 9 8
606 22.63 atmosphere 1015.0 270 < th dose independent rect. 15 18
643 22.65 wind 7.0 270 < th dose independent rect. 7 8
687 22.67 radiation 40.0 270 < th dose dependent rect. 24 21
737 22.71 radiation 20.0 10 < th dose independent rect. 4 19
741 22.71 radiation 1.0 30 < th dose dependent sin 22 NA
754 22.72 temperature 10.0 270 > th dose dependent rect. 19 20
756 22.73 temperature 10.0 90 > th dose independent rect. 9 8
757 22.73 atmosphere 1015.0 90 < th dose independent rect. 9 8
763 22.73 atmosphere 995.0 270 > th dose independent rect. 3 16
767 22.73 wind 9.0 10 < th dose dependent rect. 16 7
775 22.74 temperature 10.0 270 > th dose independent rect. 17 1
777 22.74 atmosphere 1010.0 270 < th dose independent rect. 17 1
788 22.74 temperature 10.0 270 > th dose independent rect. 18 23
796 22.74 temperature 10.0 270 > th dose dependent rect. 20 18
826 22.77 radiation 1.0 30 > th dose independent sin 22 NA
838 22.77 radiation 40.0 90 < th dose independent rect. 17 16
857 22.78 wind 1.0 90 > th dose independent rect. 9 8
869 22.79 wind 9.0 270 < th dose independent rect. 17 1
884 22.80 wind 1.0 270 > th dose independent rect. 17 1
886 22.80 humidity 50.0 14400 > th dose independent rect. 18 6
898 22.80 temperature 10.0 10 > th dose dependent rect. 17 6
911 22.81 humidity 50.0 1440 > th dose independent rect. 18 6
929 22.81 radiation 20.0 90 < th dose independent rect. 17 16
939 22.81 temperature 10.0 270 > th dose dependent rect. 15 18
941 22.82 radiation 1.0 30 < th dose independent sin 22 NA
976 22.83 radiation 10.0 30 < th dose independent rect. 8 15
978 22.83 wind 9.0 90 < th dose independent rect. 17 16