Os01g0512400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0512400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.83 | 0.514 | 4.74 | -0.364 | 0.372 | -2.16 | -0.249 | -1.84 | -0.393 | 23.9 | 25.18 | 3822 | -- | -- |
| 121.77 | 0.514 | 4.8 | -0.611 | 0.479 | -1.88 | -0.143 | -- | -0.446 | 23.7 | 26.42 | 2963 | -- | -- |
| 120.09 | 0.51 | 4.74 | -0.367 | 0.373 | -2.16 | -- | -1.79 | -0.396 | 23.8 | 25.14 | 3822 | -- | -- |
| 121.68 | 0.514 | 4.8 | -0.585 | 0.429 | -1.89 | -- | -- | -0.464 | 23.3 | 26.38 | 2847 | -- | -- |
| 128.66 | 0.528 | 4.73 | -0.347 | -- | -2.24 | -- | -1.92 | -0.393 | -- | 25.35 | 3800 | -- | -- |
| 182.94 | 0.634 | 4.69 | 0.206 | 0.506 | -- | -0.164 | -- | 0.0202 | 0.101 | -- | -- | -- | -- |
| 183.06 | 0.634 | 4.69 | 0.212 | 0.507 | -- | -- | -- | 0.0211 | 0.0615 | -- | -- | -- | -- |
| 127.05 | 0.525 | 4.79 | -0.552 | -- | -1.9 | -- | -- | -0.475 | -- | 27.44 | 2388 | -- | -- |
| 126.66 | 0.524 | 4.75 | -- | 0.374 | -1.65 | -- | -- | -0.299 | 0.678 | 31.59 | 2116 | -- | -- |
| 199.23 | 0.66 | 4.68 | 0.228 | -- | -- | -- | -- | 0.0283 | -- | -- | -- | -- | -- |
| 184.25 | 0.635 | 4.7 | -- | 0.51 | -- | -- | -- | -0.00254 | 0.0848 | -- | -- | -- | -- |
| 132.71 | 0.537 | 4.76 | -- | -- | -1.91 | -- | -- | -0.308 | -- | 30.93 | 998 | -- | -- |
| 200.6 | 0.661 | 4.69 | -- | -- | -- | -- | -- | 0.00301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.63 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 3 | 115.67 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 5 | 115.69 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 7 | 115.74 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 29 | 115.91 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 41 | 115.95 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 46 | 115.99 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 113 | 116.56 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 119 | 116.60 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 225 | 117.31 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 423 | 118.44 | temperature | 15 | 4320 | > th | dose dependent | sin | 12 | NA |