Os01g0510600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0510600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Tetratricopeptide-like helical domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.7 | 0.462 | 12 | 0.292 | 1.45 | -7.1 | 0.709 | -12.6 | -0.41 | 19.2 | 15.2 | 4911 | -- | -- |
| 108.26 | 0.488 | 11.8 | -0.644 | 1.45 | -0.639 | 0.718 | -- | -0.52 | 19.2 | 15.01 | 346 | -- | -- |
| 98.04 | 0.461 | 12 | 0.278 | 1.45 | -7.12 | -- | -12.7 | -0.409 | 19.2 | 15.2 | 4913 | -- | -- |
| 97.45 | 0.46 | 11.8 | -0.235 | 1.5 | -1.16 | -- | -- | -0.413 | 19.3 | 16.2 | 6232 | -- | -- |
| 208.57 | 0.673 | 12 | 0.306 | -- | -6.96 | -- | -12.3 | -0.418 | -- | 15.31 | 5889 | -- | -- |
| 109.05 | 0.49 | 11.8 | -0.67 | 1.45 | -- | 0.681 | -- | -0.526 | 19.2 | -- | -- | -- | -- |
| 110.28 | 0.492 | 11.8 | -0.683 | 1.45 | -- | -- | -- | -0.525 | 19.2 | -- | -- | -- | -- |
| 207.66 | 0.671 | 11.7 | -0.177 | -- | -1.16 | -- | -- | -0.372 | -- | 17.35 | 5820 | -- | -- |
| 98.02 | 0.461 | 11.8 | -- | 1.46 | -1.33 | -- | -- | -0.362 | 19.2 | 16.27 | 6272 | -- | -- |
| 222.09 | 0.696 | 11.8 | -0.71 | -- | -- | -- | -- | -0.55 | -- | -- | -- | -- | -- |
| 122.59 | 0.518 | 11.8 | -- | 1.46 | -- | -- | -- | -0.448 | 19.1 | -- | -- | -- | -- |
| 207.96 | 0.672 | 11.7 | -- | -- | -1.32 | -- | -- | -0.334 | -- | 17.3 | 5863 | -- | -- |
| 235.39 | 0.716 | 11.8 | -- | -- | -- | -- | -- | -0.471 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.23 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 2 | 91.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 3 | 91.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 4 | 91.93 | wind | 7.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 7 | 92.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 8 | 92.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 11 | 92.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 12 | 92.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 17 | 92.45 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 20 | 92.57 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 23 | 92.72 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 24 | 92.73 | wind | 7.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 25 | 92.74 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 26 | 92.74 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 27 | 92.78 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 29 | 92.82 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 31 | 92.84 | wind | 7.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 34 | 92.86 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 35 | 92.86 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 39 | 92.88 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 40 | 92.89 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 46 | 92.93 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 50 | 92.94 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 55 | 92.96 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 58 | 92.97 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 69 | 93.01 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 74 | 93.03 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 105 | 93.15 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 122 | 93.22 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 14 |
| 146 | 93.30 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 179 | 93.44 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 180 | 93.44 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 15 |
| 233 | 93.63 | wind | 7.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 236 | 93.63 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 242 | 93.65 | wind | 7.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 251 | 93.66 | wind | 1.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 292 | 93.75 | wind | 7.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 298 | 93.75 | wind | 7.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 344 | 93.86 | wind | 1.0 | 43200 | > th | dose independent | rect. | 12 | 12 |
| 359 | 93.89 | wind | 1.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 372 | 93.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 6 | 21 |
| 400 | 94.00 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 417 | 94.06 | wind | 1.0 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 464 | 94.17 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 470 | 94.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 475 | 94.20 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 18 |
| 496 | 94.25 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 499 | 94.25 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 20 |
| 501 | 94.26 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 505 | 94.27 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 19 |
| 538 | 94.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 12 |
| 543 | 94.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 18 |
| 557 | 94.43 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 566 | 94.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 567 | 94.45 | wind | 7.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 572 | 94.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 578 | 94.48 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 610 | 94.56 | wind | 7.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 620 | 94.57 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 671 | 94.71 | wind | 1.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 685 | 94.74 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 686 | 94.74 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 703 | 94.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 760 | 94.97 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 788 | 95.05 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 793 | 95.06 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 11 |
| 840 | 95.19 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 846 | 95.21 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 858 | 95.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 861 | 95.23 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 15 |
| 898 | 95.31 | temperature | 20.0 | 90 | > th | dose independent | sin | 6 | NA |
| 899 | 95.31 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 922 | 95.35 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 956 | 95.40 | temperature | 20.0 | 90 | < th | dose independent | sin | 5 | NA |
| 973 | 95.42 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 15 | 6 |