Os01g0508100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ferritin/ribonucleotide reductase-like family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0508100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ferritin/ribonucleotide reductase-like family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 889.23 | 1.4 | 5.31 | -4.27 | 0.892 | -0.7 | 22.5 | 30.8 | 0.122 | 15.8 | 0.1878 | 726 | 10.9 | -- |
| 1024.92 | 1.5 | 5.1 | -3.19 | 1.25 | 0.771 | -2 | -- | 0.458 | 13 | 240.8 | 2 | 11.2 | -- |
| 1022.71 | 1.5 | 5.14 | -3.34 | 1.63 | -0.845 | -- | 1.68 | 0.441 | 16.1 | 0.0002022 | 1237 | 14.8 | -- |
| 971.01 | 1.45 | 5.11 | -3.4 | 1.57 | -1.38 | -- | -- | 0.368 | 15 | 0.2329 | 4312 | 14 | -- |
| 947.21 | 1.43 | 5.04 | -3.68 | -- | -2.63 | -- | 5.16 | 0.669 | -- | 0.2065 | 753 | 14.3 | -- |
| 1028.05 | 1.5 | 5.11 | -3.22 | 1.47 | -- | -1.93 | -- | 0.455 | 14.9 | -- | -- | -- | -- |
| 1040.38 | 1.51 | 5.12 | -3.27 | 1.47 | -- | -- | -- | 0.444 | 15.1 | -- | -- | -- | -- |
| 932.01 | 1.42 | 5.27 | -4.09 | -- | -4.58 | -- | -- | 0.011 | -- | 0.2335 | 2147 | 15.4 | -- |
| 1282.24 | 1.67 | 5 | -- | 1.61 | -2.13 | -- | -- | 0.274 | 14.4 | 9.771 | 4275 | 10.7 | -- |
| 1163.74 | 1.59 | 5.13 | -3.33 | -- | -- | -- | -- | 0.406 | -- | -- | -- | -- | -- |
| 1321.42 | 1.7 | 5.04 | -- | 1.53 | -- | -- | -- | 0.808 | 15.1 | -- | -- | -- | -- |
| 1278.98 | 1.67 | 5.12 | -- | -- | -2.8 | -- | -- | 0.511 | -- | 9 | 4998 | 11 | -- |
| 1455.92 | 1.78 | 5.04 | -- | -- | -- | -- | -- | 0.775 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 829.88 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 2 | 830.07 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 23 | 15 |
| 17 | 831.22 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 20 | 831.38 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 51 | 833.71 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 60 | 834.47 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 65 | 834.81 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 93 | 837.51 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 114 | 839.01 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 133 | 840.62 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 173 | 844.66 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 200 | 848.09 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 266 | 856.57 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 282 | 856.57 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 324 | 859.10 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 336 | 859.18 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 363 | 859.18 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 407 | 859.26 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 476 | 860.11 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 18 |
| 492 | 860.81 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 519 | 862.02 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 532 | 863.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 533 | 863.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 548 | 863.87 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 555 | 864.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 556 | 864.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 558 | 864.60 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 559 | 864.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 560 | 864.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 563 | 864.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 564 | 864.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 568 | 864.90 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 575 | 865.82 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 579 | 866.66 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 583 | 866.69 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 586 | 866.71 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 588 | 866.72 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 593 | 866.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 596 | 867.12 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 598 | 867.16 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 610 | 867.16 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 622 | 867.17 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 670 | 868.46 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 9 | 11 |
| 680 | 868.78 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 681 | 868.79 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 684 | 868.82 | atmosphere | 995.0 | 43200 | < th | dose dependent | no | NA | NA |
| 693 | 868.86 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 704 | 869.13 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 709 | 869.36 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 711 | 869.38 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 712 | 869.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 719 | 869.49 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 21 | NA |
| 736 | 869.53 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 767 | 869.79 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 12 |
| 771 | 869.85 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 7 |
| 803 | 870.28 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 816 | 870.54 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 820 | 870.60 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 822 | 870.63 | radiation | 10.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 916 | 872.16 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 950 | 872.35 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 993 | 872.66 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 1 |