Os01g0508000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-glucosidase.
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Os01g0508000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-glucosidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 218.23 | 0.694 | 9.05 | -5.09 | 1.07 | -4.86 | 1.44 | -0.462 | -0.621 | 8.31 | 28.24 | 5022 | -- | -- |
| 218.43 | 0.688 | 9.06 | -5.19 | 1.07 | -4.81 | 1.44 | -- | -0.646 | 8.29 | 28.2 | 5019 | -- | -- |
| 223.56 | 0.696 | 9.05 | -5.08 | 1.07 | -4.91 | -- | -0.452 | -0.643 | 8.88 | 28 | 5139 | -- | -- |
| 223.79 | 0.697 | 9.06 | -5.14 | 1.06 | -4.85 | -- | -- | -0.634 | 8.9 | 28.4 | 5145 | -- | -- |
| 272.06 | 0.768 | 9.1 | -5.18 | -- | -4.67 | -- | 0.708 | -0.612 | -- | 32.5 | 5769 | -- | -- |
| 594.57 | 1.14 | 8.81 | -2.82 | 0.912 | -- | 1.64 | -- | 0.482 | 7.61 | -- | -- | -- | -- |
| 601.02 | 1.15 | 8.81 | -2.77 | 0.913 | -- | -- | -- | 0.483 | 8.18 | -- | -- | -- | -- |
| 272.63 | 0.769 | 9.08 | -5.08 | -- | -4.76 | -- | -- | -0.584 | -- | 31.46 | 5758 | -- | -- |
| 664.74 | 1.2 | 8.83 | -- | 0.985 | -2.72 | -- | -- | 0.399 | 9.54 | 133.7 | 1266 | -- | -- |
| 646.96 | 1.19 | 8.84 | -2.77 | -- | -- | -- | -- | 0.494 | -- | -- | -- | -- | -- |
| 803.74 | 1.33 | 8.74 | -- | 0.899 | -- | -- | -- | 0.792 | 8.4 | -- | -- | -- | -- |
| 711.97 | 1.24 | 8.86 | -- | -- | -2.62 | -- | -- | 0.408 | -- | 138.7 | 1444 | -- | -- |
| 848.8 | 1.36 | 8.77 | -- | -- | -- | -- | -- | 0.801 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 223.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 224.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 5 | 225.01 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 6 | 225.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 12 |
| 9 | 225.43 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 15 | 225.78 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 19 | 225.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 26 | 226.09 | temperature | 30 | 4320 | < th | dose dependent | sin | 4 | NA |
| 39 | 226.33 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 14 |
| 66 | 226.81 | temperature | 10 | 4320 | > th | dose dependent | sin | 4 | NA |
| 209 | 230.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 223 | 230.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 239 | 230.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 330 | 231.43 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 340 | 231.46 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 376 | 231.88 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 385 | 232.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 389 | 232.07 | temperature | 30 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 390 | 232.08 | temperature | 30 | 4320 | < th | dose dependent | rect. | 11 | 23 |
| 396 | 232.16 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 405 | 232.23 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 414 | 232.27 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 415 | 232.27 | temperature | 10 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 416 | 232.27 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 23 |
| 417 | 232.29 | humidity | 60 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 420 | 232.34 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 429 | 232.43 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 23 |
| 433 | 232.45 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 23 |
| 612 | 234.15 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 659 | 234.71 | humidity | 60 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 660 | 234.71 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 759 | 235.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 773 | 236.00 | radiation | 1 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 879 | 236.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 884 | 236.62 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 19 |
| 887 | 236.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 905 | 236.76 | radiation | 1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 956 | 237.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 8 |