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Os01g0506100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Globin-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.98 (0.0215) R2 : 0.532
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.886 (0.0524) R2dC : 0.313 R2C : 0.361
β3 : -0.625 (0.0574) R2dE : 0.134 R2E : 0.198
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.171 (0.0461) R2dN8 : 0.0192 R2N8 : 0.0374
σ : 0.402
deviance : 74.6
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_____
C
peak time of C : 13.9
E
wheather : temperature
threshold : 26.52
memory length : 6884
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.77 0.363 8.87 1.45 0.819 -1.2 0.829 3.56 0.0646 13.9 25.06 1241 -- --
63.21 0.37 8.93 0.859 0.917 -1.04 0.685 -- 0.0563 13.7 17.03 6977 -- --
62.03 0.367 8.88 1.48 0.852 -1.21 -- 3.85 -0.00585 13.8 26.2 1240 -- --
65.16 0.376 8.93 0.87 0.913 -1.02 -- -- 0.0595 13.6 17.9 6957 -- --
96.5 0.458 8.88 1.39 -- -1.5 -- 3.02 0.105 -- 24 1118 -- --
89.25 0.443 9.01 0.278 0.979 -- 0.793 -- -0.258 13.8 -- -- -- --
91.68 0.448 9 0.303 0.978 -- -- -- -0.254 13.6 -- -- -- --
100.52 0.467 8.97 0.627 -- -1.22 -- -- -0.0956 -- 24.06 1111 -- --
74.6 0.402 8.98 -- 0.886 -0.625 -- -- -0.171 13.9 26.52 6884 -- --
150.05 0.572 9.01 0.264 -- -- -- -- -0.276 -- -- -- -- --
94.11 0.454 9.01 -- 0.973 -- -- -- -0.288 13.6 -- -- -- --
110.37 0.489 9 -- -- -1.09 -- -- -0.197 -- 24.35 1104 -- --
151.88 0.575 9.02 -- -- -- -- -- -0.305 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.49 temperature 25 1440 > th dose dependent rect. 16 2
2 59.52 temperature 25 1440 > th dose dependent rect. 12 7
5 59.60 temperature 25 1440 > th dose dependent rect. 14 5
56 60.20 temperature 25 1440 > th dose dependent sin 18 NA
96 60.55 radiation 40 4320 < th dose dependent rect. 18 9
118 60.85 humidity 90 43200 > th dose independent rect. 22 1
122 60.89 temperature 25 1440 > th dose dependent rect. 12 1
134 60.97 radiation 1 14400 < th dose dependent rect. 18 7
135 60.97 radiation 1 14400 < th dose dependent rect. 18 9
142 60.99 radiation 1 14400 < th dose dependent rect. 18 1
149 61.02 radiation 1 14400 > th dose independent rect. 18 12
152 61.03 radiation 1 1440 < th dose dependent rect. 18 9
159 61.08 radiation 1 14400 > th dose independent rect. 18 1
188 61.20 radiation 30 14400 > th dose independent rect. 16 16
198 61.30 temperature 25 1440 > th dose dependent rect. 3 17
239 61.39 temperature 25 4320 < th dose independent rect. 7 7
262 61.45 temperature 25 4320 < th dose independent rect. 4 10
266 61.46 radiation 1 14400 < th dose independent rect. 18 11
272 61.47 radiation 1 14400 < th dose independent rect. 18 9
273 61.47 temperature 25 4320 > th dose independent rect. 4 11
298 61.51 humidity 90 43200 > th dose independent rect. 9 15
310 61.53 temperature 25 1440 > th dose dependent no NA NA
319 61.54 wind 5 43200 > th dose dependent rect. 10 2
322 61.55 wind 7 43200 > th dose independent rect. 10 1
323 61.55 temperature 25 4320 > th dose independent rect. 7 7
324 61.55 humidity 90 43200 > th dose independent rect. 11 13
333 61.58 humidity 90 43200 > th dose independent rect. 9 1
342 61.60 humidity 90 43200 > th dose independent rect. 15 8
345 61.60 radiation 1 1440 < th dose dependent rect. 18 1
348 61.61 radiation 1 14400 < th dose independent rect. 18 1
375 61.66 wind 7 43200 > th dose independent rect. 9 3
378 61.67 humidity 90 43200 > th dose independent rect. 17 6
381 61.68 temperature 25 4320 > th dose independent rect. 8 5
399 61.72 humidity 90 43200 > th dose dependent rect. 22 1
405 61.73 humidity 90 43200 > th dose dependent rect. 18 5
415 61.75 humidity 90 43200 > th dose independent rect. 4 20
417 61.75 temperature 25 1440 > th dose dependent rect. 14 23
426 61.77 atmosphere 1005 43200 > th dose independent rect. 16 1
428 61.78 wind 7 43200 < th dose independent rect. 9 3
433 61.78 humidity 90 43200 > th dose dependent rect. 4 20
434 61.79 wind 7 43200 < th dose independent rect. 10 1
435 61.79 wind 7 43200 > th dose independent rect. 5 7
451 61.81 humidity 90 43200 > th dose dependent rect. 11 13
460 61.83 humidity 90 43200 > th dose independent sin 19 NA
461 61.83 wind 7 43200 < th dose independent rect. 5 8
467 61.84 humidity 90 43200 > th dose dependent rect. 9 15
468 61.85 humidity 80 43200 > th dose independent rect. 12 1
478 61.88 humidity 90 43200 < th dose independent rect. 13 10
486 61.89 humidity 90 43200 < th dose independent rect. 9 14
491 61.89 temperature 25 1440 > th dose dependent rect. 16 23
503 61.92 humidity 90 43200 < th dose independent rect. 9 2
533 61.97 humidity 90 43200 > th dose dependent sin 19 NA
534 61.97 radiation 1 14400 < th dose dependent rect. 18 13
542 61.99 humidity 90 43200 < th dose independent sin 19 NA
549 61.99 wind 5 43200 > th dose dependent rect. 9 4
554 62.00 humidity 90 43200 < th dose independent rect. 8 17
556 62.00 radiation 1 14400 < th dose dependent rect. 18 21
561 62.02 radiation 1 14400 > th dose independent rect. 5 1
562 62.02 radiation 1 14400 < th dose independent rect. 5 1
572 62.03 humidity 90 43200 < th dose independent rect. 17 4
579 62.04 humidity 90 43200 < th dose independent rect. 17 6
585 62.05 humidity 90 43200 < th dose independent rect. 22 1
633 62.11 humidity 90 43200 < th dose independent rect. 3 20
671 62.15 humidity 80 43200 < th dose independent rect. 12 1
690 62.16 humidity 80 43200 > th dose dependent rect. 12 1
691 62.16 humidity 80 43200 > th dose dependent rect. 10 3
719 62.20 humidity 90 43200 < th dose independent rect. 18 1
728 62.20 wind 9 43200 < th dose dependent rect. 11 1
735 62.21 temperature 25 4320 > th dose independent sin 2 NA
784 62.26 atmosphere 1005 43200 < th dose independent rect. 16 1
791 62.26 humidity 80 43200 > th dose dependent rect. 9 6
793 62.26 wind 5 43200 > th dose dependent rect. 5 9
794 62.27 temperature 25 4320 < th dose independent sin 2 NA
820 62.30 humidity 90 14400 < th dose independent rect. 21 5
829 62.31 radiation 1 14400 > th dose independent rect. 18 21
852 62.33 radiation 30 14400 > th dose independent rect. 7 1
873 62.34 atmosphere 1005 43200 > th dose independent rect. 18 1
883 62.35 atmosphere 1005 43200 < th dose independent rect. 16 3
895 62.36 humidity 90 43200 > th dose dependent sin 0 NA
928 62.39 radiation 1 14400 < th dose dependent rect. 24 5
968 62.44 radiation 1 14400 < th dose independent rect. 18 21
971 62.45 humidity 90 43200 > th dose independent sin 2 NA
981 62.45 humidity 80 43200 > th dose dependent rect. 9 10
989 62.46 radiation 1 14400 < th dose dependent rect. 6 18
991 62.46 radiation 1 14400 < th dose dependent rect. 6 23