Os01g0505600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Flagellar calcium-binding protein (calflagin) family protein.
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Os01g0505600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Flagellar calcium-binding protein (calflagin) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.52 | 0.509 | 2.83 | -0.143 | 0.00848 | 3 | -0.416 | -18.6 | 0.0982 | 23.5 | 997.1 | 1686 | -- | -- |
| 117.76 | 0.505 | 2.78 | 0.18 | 0.0139 | 1.49 | -0.397 | -- | 0.107 | 22.1 | 991.6 | 2732 | -- | -- |
| 118.21 | 0.506 | 2.81 | -0.0359 | 0.0115 | 1.97 | -- | -12.6 | 0.102 | 21.6 | 996.9 | 1775 | -- | -- |
| 118.4 | 0.507 | 2.78 | 0.196 | 0.0165 | 1.42 | -- | -- | 0.103 | 22 | 993.3 | 2637 | -- | -- |
| 118.21 | 0.506 | 2.81 | -0.0112 | -- | 1.82 | -- | -11.7 | 0.101 | -- | 997.1 | 1777 | -- | -- |
| 123.93 | 0.522 | 2.78 | 0.133 | 0.0196 | -- | 0.273 | -- | 0.0848 | 11.6 | -- | -- | -- | -- |
| 124.24 | 0.522 | 2.78 | 0.145 | 0.0243 | -- | -- | -- | 0.0863 | 14.4 | -- | -- | -- | -- |
| 118.41 | 0.507 | 2.78 | 0.196 | -- | 1.41 | -- | -- | 0.103 | -- | 993.3 | 2667 | -- | -- |
| 119.39 | 0.509 | 2.78 | -- | 0.0166 | 1.35 | -- | -- | 0.0813 | 21.4 | 992.5 | 2647 | -- | -- |
| 124.27 | 0.521 | 2.78 | 0.144 | -- | -- | -- | -- | 0.0857 | -- | -- | -- | -- | -- |
| 124.79 | 0.523 | 2.78 | -- | 0.0215 | -- | -- | -- | 0.0702 | 14.2 | -- | -- | -- | -- |
| 119.41 | 0.509 | 2.78 | -- | -- | 1.35 | -- | -- | 0.0811 | -- | 993.9 | 2292 | -- | -- |
| 124.82 | 0.521 | 2.78 | -- | -- | -- | -- | -- | 0.0698 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.90 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 7 |
| 9 | 106.90 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 17 | 106.99 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 20 | 106.99 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 39 | 106.99 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 42 | 106.99 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 61 | 107.00 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 65 | 107.00 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 67 | 107.05 | radiation | 1.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 79 | 107.06 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 114 | 107.06 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 116 | 107.06 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 271 | 111.27 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 4 | 11 |
| 286 | 112.53 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 11 |
| 353 | 115.29 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 382 | 115.72 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 384 | 115.90 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 392 | 116.03 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 23 | 12 |
| 393 | 116.05 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 403 | 116.22 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 21 | 14 |
| 408 | 116.29 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 414 | 116.31 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 454 | 116.61 | wind | 3.0 | 270 | > th | dose independent | rect. | 6 | 1 |
| 476 | 116.71 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 491 | 116.92 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 506 | 117.02 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 524 | 117.20 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 530 | 117.24 | precipitation | 0.1 | 270 | < th | dose independent | sin | 3 | NA |
| 531 | 117.24 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 3 | NA |
| 533 | 117.26 | precipitation | 0.1 | 270 | > th | dose independent | sin | 3 | NA |
| 552 | 117.35 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 23 | 5 |
| 553 | 117.35 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 570 | 117.49 | atmosphere | 995.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 580 | 117.57 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 583 | 117.58 | temperature | 30.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 585 | 117.58 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 657 | 117.67 | wind | 9.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 658 | 117.67 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 663 | 117.67 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 810 | 117.67 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 811 | 117.67 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 816 | 117.67 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |