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Os01g0501000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.00916) R2 : 0.0661
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.11 (0.0193) R2dN8 : 0.0854 R2N8 : 0.0661
σ : 0.172
deviance : 13.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
9.62 0.146 11.2 0.383 0.174 2.49 -0.0645 3.97 0.159 1.75 15.62 3912 -- --
9.88 0.146 11.2 0.341 0.166 0.346 -0.0122 -- 0.171 2.05 15.2 10692 -- --
9.63 0.145 11.2 0.381 0.174 2.54 -- 4.03 0.157 1.74 15.54 3895 -- --
9.87 0.146 11.2 0.337 0.166 0.343 -- -- 0.171 1.79 14.9 10679 -- --
11.46 0.158 11.2 0.389 -- 2.66 -- 4.42 0.159 -- 15.57 3873 -- --
11.27 0.157 11.2 0.162 0.164 -- 0.00133 -- 0.125 1.78 -- -- -- --
11.27 0.157 11.2 0.162 0.164 -- -- -- 0.125 1.78 -- -- -- --
11.53 0.158 11.2 0.343 -- 0.343 -- -- 0.175 -- 14.8 10626 -- --
11.68 0.159 11.2 -- 0.201 0.159 -- -- 0.144 1.88 8.531 36663 -- --
12.9 0.168 11.2 0.169 -- -- -- -- 0.128 -- -- -- -- --
11.96 0.162 11.2 -- 0.167 -- -- -- 0.107 1.8 -- -- -- --
12.62 0.166 11.2 -- -- 0.244 -- -- 0.139 -- 33.21 32739 -- --
13.65 0.172 11.2 -- -- -- -- -- 0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 8.80 temperature 20 270 > th dose independent rect. 7 8
6 9.01 temperature 20 90 > th dose independent rect. 9 8
12 9.20 humidity 90 270 < th dose independent rect. 7 8
14 9.24 temperature 15 90 > th dose dependent rect. 9 7
15 9.26 wind 9 14400 < th dose independent rect. 19 1
20 9.29 temperature 15 4320 > th dose independent rect. 11 2
21 9.29 temperature 20 10 > th dose independent rect. 10 8
23 9.30 temperature 20 10 > th dose independent rect. 10 6
26 9.32 temperature 15 270 > th dose dependent rect. 7 7
31 9.34 temperature 15 10 > th dose dependent rect. 10 8
34 9.35 humidity 90 30 < th dose dependent rect. 10 6
36 9.36 humidity 90 90 < th dose independent rect. 9 8
38 9.37 temperature 10 43200 > th dose independent rect. 17 3
39 9.37 temperature 15 10 > th dose dependent rect. 10 6
42 9.38 temperature 20 90 < th dose independent sin 1 NA
43 9.38 temperature 10 43200 > th dose independent rect. 13 7
49 9.39 temperature 20 270 > th dose independent rect. 19 20
50 9.39 humidity 70 43200 > th dose dependent rect. 15 18
57 9.40 humidity 80 43200 > th dose independent sin 4 NA
61 9.40 humidity 80 43200 > th dose independent rect. 1 13
62 9.40 humidity 80 43200 > th dose independent rect. 22 23
67 9.41 temperature 20 90 > th dose independent sin 0 NA
69 9.41 temperature 10 43200 > th dose independent rect. 19 1
70 9.41 humidity 80 43200 > th dose independent rect. 24 15
71 9.41 humidity 80 43200 < th dose independent rect. 24 15
79 9.41 wind 9 43200 > th dose dependent rect. 19 19
87 9.42 wind 3 43200 > th dose independent rect. 21 8
91 9.42 humidity 80 43200 < th dose independent rect. 23 17
92 9.42 wind 9 43200 > th dose independent rect. 18 18
96 9.42 temperature 10 30 > th dose dependent sin 2 NA
98 9.42 humidity 70 43200 > th dose dependent sin 14 NA
100 9.42 humidity 70 43200 > th dose dependent rect. 17 8
103 9.42 humidity 70 43200 > th dose dependent rect. 16 10
107 9.42 humidity 60 43200 > th dose dependent rect. 12 18
111 9.42 wind 9 43200 > th dose dependent rect. 17 21
114 9.43 humidity 80 43200 < th dose independent rect. 1 1
116 9.43 wind 3 43200 > th dose independent rect. 23 6
118 9.43 wind 3 43200 < th dose independent rect. 21 8
119 9.43 humidity 90 10 < th dose independent rect. 10 8
125 9.43 humidity 80 43200 > th dose independent rect. 8 23
126 9.43 humidity 80 43200 < th dose independent rect. 22 23
132 9.43 humidity 60 30 > th dose dependent sin 0 NA
142 9.43 temperature 30 30 < th dose dependent rect. 4 15
152 9.44 wind 3 43200 < th dose independent rect. 23 5
159 9.44 wind 3 43200 > th dose independent rect. 22 12
161 9.44 wind 3 43200 > th dose independent rect. 20 13
164 9.44 humidity 80 43200 < th dose independent rect. 1 13
168 9.44 temperature 20 270 < th dose independent rect. 4 15
169 9.44 wind 9 43200 < th dose independent rect. 18 17
173 9.44 wind 3 43200 > th dose dependent sin 11 NA
177 9.44 wind 1 43200 > th dose dependent rect. 20 9
179 9.44 wind 3 43200 > th dose dependent rect. 18 14
183 9.44 humidity 60 43200 > th dose dependent rect. 12 16
195 9.45 wind 3 43200 > th dose independent sin 8 NA
199 9.45 humidity 80 43200 < th dose independent rect. 1 5
212 9.45 wind 3 43200 < th dose independent rect. 21 13
219 9.45 humidity 80 43200 > th dose independent rect. 3 23
226 9.45 temperature 30 30 < th dose dependent sin 1 NA
230 9.45 humidity 80 43200 < th dose dependent rect. 22 1
231 9.45 humidity 80 43200 < th dose dependent rect. 22 5
253 9.45 temperature 20 270 < th dose dependent rect. 24 19
260 9.45 wind 9 43200 > th dose dependent rect. 19 23
263 9.46 humidity 80 43200 > th dose independent no NA NA
264 9.46 humidity 80 43200 < th dose independent sin 4 NA
271 9.46 humidity 80 10 < th dose independent rect. 10 6
280 9.46 wind 3 43200 < th dose independent rect. 23 11
293 9.46 temperature 20 270 > th dose independent rect. 22 15
337 9.46 wind 3 43200 > th dose dependent rect. 23 16
338 9.46 temperature 20 270 < th dose dependent rect. 3 16
342 9.46 humidity 60 43200 > th dose dependent rect. 23 17
359 9.47 wind 3 43200 < th dose independent sin 9 NA
360 9.47 humidity 80 43200 > th dose independent rect. 1 1
363 9.47 humidity 80 43200 < th dose independent rect. 3 3
376 9.47 wind 5 14400 > th dose independent rect. 4 9
377 9.47 wind 5 14400 < th dose independent rect. 4 9
407 9.47 humidity 80 43200 < th dose independent rect. 8 22
409 9.47 humidity 80 43200 > th dose independent rect. 18 23
416 9.47 humidity 70 43200 > th dose dependent sin 7 NA
418 9.47 humidity 80 43200 < th dose dependent rect. 1 1
433 9.47 wind 1 43200 > th dose dependent rect. 20 14
461 9.47 wind 9 43200 > th dose dependent rect. 12 23
463 9.48 wind 9 43200 > th dose independent sin 8 NA
473 9.48 humidity 80 43200 < th dose independent rect. 22 4
507 9.48 humidity 80 43200 > th dose independent rect. 11 18
528 9.48 wind 3 43200 > th dose dependent sin 4 NA
529 9.48 wind 9 43200 > th dose dependent no NA NA
535 9.48 wind 7 43200 < th dose dependent rect. 23 5
542 9.48 wind 9 43200 < th dose dependent rect. 20 9
564 9.48 wind 7 43200 > th dose dependent rect. 18 17
574 9.48 wind 9 43200 > th dose dependent rect. 4 20
603 9.48 wind 9 43200 > th dose dependent rect. 22 23
609 9.49 humidity 80 43200 < th dose independent no NA NA
657 9.49 humidity 80 43200 < th dose independent rect. 3 23
659 9.49 wind 9 43200 > th dose dependent sin 11 NA
662 9.49 wind 7 43200 > th dose dependent sin 6 NA
663 9.49 wind 9 43200 < th dose dependent sin 8 NA
685 9.49 wind 1 43200 > th dose dependent rect. 23 11
692 9.49 wind 9 43200 < th dose dependent rect. 21 13
715 9.49 wind 9 43200 > th dose dependent rect. 6 17
738 9.49 wind 9 43200 > th dose dependent rect. 22 20
757 9.50 wind 9 43200 < th dose independent sin 8 NA
759 9.50 temperature 15 4320 > th dose independent rect. 19 1
760 9.50 humidity 80 43200 > th dose independent rect. 4 1
783 9.50 humidity 70 90 > th dose independent rect. 3 10
828 9.50 wind 5 14400 > th dose dependent rect. 6 5
829 9.50 wind 1 43200 > th dose dependent rect. 23 5
841 9.50 humidity 70 43200 > th dose dependent rect. 1 10
843 9.50 wind 7 43200 < th dose dependent rect. 23 11
850 9.50 humidity 70 43200 > th dose dependent rect. 24 12
861 9.50 wind 9 43200 < th dose dependent rect. 23 15
913 9.51 wind 9 43200 > th dose independent rect. 8 4
938 9.51 humidity 80 43200 < th dose independent rect. 11 18
954 9.51 humidity 80 43200 < th dose independent rect. 18 23
969 9.51 wind 7 43200 > th dose dependent rect. 9 2
985 9.51 wind 9 43200 > th dose dependent rect. 7 11