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Os01g0391500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.02) R2 : 0.302
β1 : -0.927 (0.0732) R2dD : 0.254 R2D : 0.276
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.154 (0.0427) R2dN8 : 0.0267 R2N8 : 0.0482
σ : 0.375
deviance : 64.53
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.98 0.345 10.4 -0.93 0.185 0.351 -0.133 -0.216 0.168 19.2 16.1 10 -- --
54.21 0.343 10.4 -0.936 0.182 0.338 -0.105 -- 0.167 18.9 16.56 11 -- --
54.01 0.342 10.4 -0.925 0.185 0.351 -- -0.177 0.17 19.5 16.11 9 -- --
54.18 0.343 10.4 -0.944 0.196 0.37 -- -- 0.167 19.8 16.57 10 -- --
55.75 0.348 10.4 -0.927 -- 0.326 -- -0.177 0.17 -- 16.94 9 -- --
58.39 0.358 10.4 -0.903 0.309 -- -0.399 -- 0.164 14.5 -- -- -- --
58.95 0.36 10.4 -0.914 0.308 -- -- -- 0.162 14.5 -- -- -- --
55.9 0.348 10.4 -0.938 -- 0.316 -- -- 0.163 -- 16.92 9 -- --
77.02 0.409 10.4 -- 0.197 0.371 -- -- 0.238 19.3 19.7 19 -- --
64.53 0.375 10.4 -0.927 -- -- -- -- 0.154 -- -- -- -- --
80.95 0.421 10.4 -- 0.326 -- -- -- 0.263 14.5 -- -- -- --
78.62 0.413 10.4 -- -- 0.343 -- -- 0.263 -- 19.97 18 -- --
87.18 0.436 10.4 -- -- -- -- -- 0.257 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.96 temperature 10.0 270 > th dose dependent rect. 20 15
18 48.09 temperature 10.0 90 > th dose dependent rect. 8 19
21 48.20 temperature 10.0 270 > th dose dependent rect. 7 4
25 48.34 humidity 50.0 270 > th dose independent rect. 6 20
28 48.38 wind 1.0 270 > th dose independent rect. 2 4
34 48.47 temperature 10.0 10 > th dose dependent rect. 9 18
35 48.48 temperature 10.0 270 > th dose dependent rect. 6 7
39 48.68 temperature 30.0 270 < th dose dependent rect. 3 2
40 48.69 wind 1.0 270 > th dose independent rect. 1 6
45 48.73 temperature 30.0 270 < th dose dependent rect. 2 4
69 49.04 wind 9.0 270 < th dose independent rect. 6 21
91 49.27 atmosphere 995.0 270 > th dose dependent rect. 2 4
94 49.29 wind 5.0 270 < th dose independent rect. 3 3
99 49.31 wind 1.0 270 > th dose independent rect. 13 17
103 49.33 precipitation 0.1 270 < th dose independent rect. 2 4
104 49.33 precipitation 0.1 270 < th dose dependent rect. 2 4
106 49.33 temperature 30.0 90 < th dose dependent rect. 3 15
119 49.39 temperature 10.0 270 > th dose dependent rect. 18 8
120 49.39 temperature 15.0 10 > th dose dependent rect. 21 18
131 49.44 temperature 10.0 270 > th dose independent rect. 2 4
133 49.44 temperature 30.0 270 < th dose independent rect. 2 4
134 49.44 humidity 50.0 270 > th dose independent rect. 2 4
137 49.44 atmosphere 995.0 270 > th dose independent rect. 2 4
138 49.44 atmosphere 1015.0 270 < th dose independent rect. 2 4
139 49.44 radiation 20.0 270 < th dose independent rect. 2 4
142 49.44 temperature 10.0 270 > th dose independent rect. 6 20
151 49.49 radiation 40.0 270 < th dose dependent rect. 3 3
169 49.50 radiation 20.0 270 < th dose dependent rect. 3 3
171 49.50 temperature 15.0 10 > th dose dependent rect. 9 6
189 49.59 wind 1.0 270 > th dose independent rect. 2 16
195 49.62 precipitation 0.1 270 < th dose independent rect. 6 20
200 49.62 precipitation 0.1 270 < th dose dependent rect. 6 20
202 49.65 wind 1.0 270 > th dose independent rect. 11 20
214 49.69 atmosphere 995.0 270 > th dose independent rect. 13 17
217 49.70 temperature 30.0 90 < th dose dependent rect. 3 6
262 49.81 radiation 1.0 270 < th dose independent rect. 3 2
264 49.81 temperature 20.0 90 > th dose independent rect. 8 20
280 49.87 atmosphere 995.0 270 > th dose independent rect. 2 15
288 49.90 humidity 50.0 270 > th dose independent rect. 17 9
298 49.95 radiation 10.0 270 < th dose independent rect. 17 9
305 49.97 wind 9.0 270 < th dose independent rect. 17 9
311 50.00 temperature 20.0 10 > th dose independent rect. 9 19
321 50.02 radiation 20.0 270 < th dose dependent rect. 17 9
337 50.09 precipitation 0.1 270 < th dose independent rect. 2 15
338 50.09 precipitation 0.1 270 < th dose dependent rect. 2 15
346 50.12 humidity 50.0 270 > th dose independent rect. 6 8
347 50.12 temperature 10.0 270 > th dose independent rect. 17 9
351 50.12 temperature 10.0 270 > th dose independent rect. 2 15
352 50.12 atmosphere 1015.0 270 < th dose independent rect. 2 15
367 50.15 radiation 10.0 270 < th dose dependent rect. 15 11
371 50.16 wind 9.0 270 < th dose dependent rect. 3 3
379 50.18 wind 7.0 270 < th dose independent rect. 6 7
383 50.19 temperature 20.0 270 > th dose independent rect. 6 20
414 50.24 temperature 15.0 270 > th dose independent rect. 6 7
418 50.24 atmosphere 995.0 90 > th dose dependent rect. 15 17
434 50.26 atmosphere 1015.0 270 < th dose independent rect. 6 20
453 50.30 precipitation 0.1 270 < th dose independent rect. 14 16
455 50.30 atmosphere 995.0 270 > th dose independent rect. 11 20
458 50.30 precipitation 0.1 270 < th dose dependent rect. 14 16
460 50.31 temperature 30.0 270 < th dose independent rect. 18 8
463 50.32 radiation 1.0 270 < th dose dependent rect. 3 7
476 50.33 precipitation 0.1 270 < th dose independent rect. 6 7
480 50.33 precipitation 0.1 270 < th dose dependent rect. 6 7
485 50.34 precipitation 0.1 270 < th dose independent rect. 17 9
487 50.34 precipitation 0.1 270 < th dose dependent rect. 17 9
507 50.38 humidity 60.0 270 > th dose independent rect. 7 4
509 50.38 atmosphere 995.0 270 > th dose independent rect. 6 7
510 50.38 atmosphere 1015.0 270 < th dose independent rect. 6 7
511 50.38 temperature 10.0 270 > th dose independent rect. 13 17
529 50.41 temperature 20.0 270 > th dose independent rect. 19 16
567 50.48 radiation 40.0 270 < th dose independent rect. 13 17
591 50.51 atmosphere 995.0 10 > th dose dependent rect. 3 6
604 50.52 atmosphere 995.0 10 > th dose dependent rect. 15 18
613 50.54 humidity 50.0 270 > th dose dependent rect. 3 3
618 50.55 wind 9.0 90 < th dose independent rect. 8 7
625 50.56 radiation 1.0 270 < th dose independent rect. 13 13
633 50.57 radiation 1.0 270 < th dose independent rect. 2 8
634 50.57 radiation 40.0 90 < th dose independent rect. 13 19
635 50.57 wind 9.0 270 < th dose dependent rect. 7 4
680 50.62 radiation 1.0 270 > th dose independent rect. 7 4
684 50.62 radiation 40.0 90 < th dose independent rect. 15 16
685 50.62 wind 9.0 10 < th dose independent rect. 9 18
695 50.64 wind 7.0 270 < th dose independent rect. 7 4
697 50.64 precipitation 0.1 10 < th dose independent rect. 3 6
702 50.64 precipitation 0.1 10 < th dose dependent rect. 3 6
715 50.66 radiation 1.0 270 > th dose independent rect. 6 7
718 50.66 wind 9.0 270 < th dose independent rect. 2 15
728 50.67 atmosphere 1015.0 90 < th dose independent rect. 8 19
752 50.70 atmosphere 995.0 90 > th dose independent rect. 8 19
758 50.71 wind 5.0 10 < th dose independent rect. 3 6
765 50.72 temperature 15.0 270 > th dose independent rect. 7 4
767 50.72 temperature 20.0 10 > th dose independent rect. 21 16
791 50.75 atmosphere 995.0 270 > th dose independent rect. 18 8
793 50.75 wind 9.0 270 < th dose independent rect. 13 17
801 50.76 humidity 50.0 90 > th dose independent rect. 8 7
805 50.76 temperature 30.0 90 < th dose dependent rect. 3 8
813 50.77 temperature 30.0 90 < th dose dependent rect. 3 12
816 50.78 temperature 20.0 270 > th dose independent rect. 18 8
819 50.78 temperature 15.0 10 > th dose dependent rect. 23 14
844 50.82 wind 1.0 90 > th dose independent rect. 8 7
869 50.85 precipitation 0.1 10 < th dose independent rect. 9 18
875 50.85 precipitation 0.1 10 < th dose dependent rect. 9 18
881 50.86 temperature 20.0 10 > th dose independent rect. 21 18
887 50.87 precipitation 0.1 270 < th dose independent rect. 7 4
889 50.87 temperature 10.0 10 > th dose independent rect. 3 6
891 50.87 temperature 30.0 10 < th dose independent rect. 3 6
892 50.87 humidity 50.0 10 > th dose independent rect. 3 6
894 50.87 atmosphere 995.0 10 > th dose independent rect. 3 6
895 50.87 atmosphere 1015.0 10 < th dose independent rect. 3 6
896 50.87 atmosphere 995.0 270 > th dose independent rect. 11 10
897 50.87 temperature 10.0 10 > th dose independent rect. 9 18
898 50.87 precipitation 0.1 270 < th dose independent rect. 11 20
901 50.87 precipitation 0.1 270 < th dose dependent rect. 7 4
907 50.87 precipitation 0.1 270 < th dose dependent rect. 11 20
948 50.89 wind 9.0 270 < th dose dependent rect. 7 6
978 50.91 humidity 90.0 270 < th dose independent rect. 7 4
993 50.92 atmosphere 995.0 270 > th dose independent rect. 7 4
994 50.92 atmosphere 1015.0 270 < th dose independent rect. 7 4
997 50.92 temperature 10.0 270 > th dose independent rect. 11 20