Os01g0390400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function Met10 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0390400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function Met10 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.65 | 0.281 | 9.72 | -0.171 | 0.296 | 1.75 | 0.809 | -0.121 | -0.117 | 7.01 | 28.05 | 342 | -- | -- |
| 35.54 | 0.278 | 9.72 | -0.184 | 0.289 | 1.76 | 0.873 | -- | -0.116 | 6.61 | 27.87 | 370 | -- | -- |
| 36.76 | 0.282 | 9.73 | -0.201 | 0.286 | 1.82 | -- | 0.213 | -0.126 | 8.56 | 28.6 | 319 | -- | -- |
| 36.81 | 0.283 | 9.72 | -0.168 | 0.289 | 1.81 | -- | -- | -0.118 | 8.58 | 28.71 | 319 | -- | -- |
| 39.79 | 0.294 | 9.73 | -0.163 | -- | 1.98 | -- | 0.201 | -0.0963 | -- | 29.2 | 382 | -- | -- |
| 78.77 | 0.416 | 9.8 | -0.638 | 0.712 | -- | 0.998 | -- | -0.501 | 6.13 | -- | -- | -- | -- |
| 81.21 | 0.422 | 9.8 | -0.628 | 0.717 | -- | -- | -- | -0.504 | 6.2 | -- | -- | -- | -- |
| 39.83 | 0.294 | 9.72 | -0.127 | -- | 1.98 | -- | -- | -0.0881 | -- | 29.26 | 382 | -- | -- |
| 37.47 | 0.285 | 9.72 | -- | 0.296 | 1.85 | -- | -- | -0.0968 | 8.73 | 28.63 | 314 | -- | -- |
| 107.9 | 0.485 | 9.81 | -0.608 | -- | -- | -- | -- | -0.488 | -- | -- | -- | -- | -- |
| 91.59 | 0.448 | 9.79 | -- | 0.709 | -- | -- | -- | -0.434 | 6.25 | -- | -- | -- | -- |
| 40.22 | 0.295 | 9.72 | -- | -- | 2.02 | -- | -- | -0.0695 | -- | 29.17 | 384 | -- | -- |
| 117.65 | 0.506 | 9.8 | -- | -- | -- | -- | -- | -0.421 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 4 | 35.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 21 |
| 16 | 36.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 29 | 37.02 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 47 | 38.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 84 | 39.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 92 | 39.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 138 | 39.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 168 | 40.21 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 369 | 40.83 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 436 | 41.02 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 505 | 41.23 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |