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Os01g0388500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.02 (0.0243) R2 : 0.257
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.699 (0.0578) R2dC : 0.239 R2C : 0.23
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0511) R2dN8 : 0.0265 R2N8 : 0.0183
σ : 0.458
deviance : 95.99
__
_____
C
peak time of C : 11.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
74.59 0.406 6.97 0.229 0.715 -1.89 0.59 -2.96 0.112 12.1 20.2 4423 -- --
78.41 0.412 7.05 0.139 0.716 -0.78 0.674 -- 0.0626 12.3 22.44 4325 -- --
76.09 0.406 6.97 0.248 0.713 -1.86 -- -2.89 0.112 12.1 20.2 4415 -- --
79.73 0.416 7.04 0.191 0.717 -0.728 -- -- 0.0768 12.1 22.45 4261 -- --
108.08 0.484 6.97 0.228 -- -1.91 -- -3.03 0.124 -- 20.04 4476 -- --
85.75 0.434 7.01 0.555 0.708 -- 0.58 -- 0.243 12 -- -- -- --
87.2 0.437 7.01 0.578 0.706 -- -- -- 0.246 12 -- -- -- --
108.25 0.487 7.04 0.388 -- -0.916 -- -- 0.133 -- 22.45 4261 -- --
80.35 0.417 7.05 -- 0.717 -0.863 -- -- 0.0364 12.1 22.2 4312 -- --
118.57 0.509 7.02 0.556 -- -- -- -- 0.236 -- -- -- -- --
95.99 0.458 7.02 -- 0.699 -- -- -- 0.181 11.9 -- -- -- --
111.95 0.494 7.06 -- -- -1.06 -- -- 0.0771 -- 22.45 4261 -- --
126.72 0.525 7.04 -- -- -- -- -- 0.174 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.73 humidity 90.0 43200 < th dose independent rect. 5 1
2 71.05 humidity 80.0 43200 > th dose dependent rect. 5 1
3 71.99 wind 1.0 43200 < th dose independent rect. 6 1
4 72.03 wind 1.0 43200 < th dose dependent rect. 6 2
6 72.28 wind 1.0 43200 < th dose independent rect. 12 20
9 72.30 wind 1.0 43200 < th dose dependent rect. 5 6
11 72.35 humidity 90.0 43200 > th dose independent rect. 5 1
14 72.46 wind 1.0 43200 < th dose independent rect. 15 19
15 72.48 wind 1.0 43200 > th dose independent rect. 13 19
17 72.55 wind 1.0 43200 > th dose independent rect. 15 17
18 72.56 wind 1.0 43200 < th dose independent sin 7 NA
21 72.60 wind 1.0 43200 > th dose independent rect. 6 1
25 72.66 humidity 90.0 43200 > th dose independent rect. 24 1
27 72.69 wind 1.0 43200 < th dose independent rect. 15 17
29 72.71 wind 1.0 43200 < th dose independent rect. 22 13
49 73.15 humidity 90.0 43200 < th dose independent rect. 19 11
50 73.16 humidity 90.0 43200 < th dose independent rect. 21 5
56 73.21 humidity 90.0 43200 < th dose independent rect. 23 2
58 73.21 wind 1.0 43200 > th dose independent rect. 4 6
61 73.22 wind 1.0 43200 < th dose dependent rect. 2 17
79 73.31 wind 1.0 43200 > th dose independent rect. 6 3
87 73.36 wind 1.0 43200 < th dose dependent rect. 2 12
92 73.38 humidity 80.0 43200 > th dose dependent rect. 16 15
96 73.39 wind 1.0 43200 < th dose dependent rect. 2 14
102 73.41 wind 1.0 43200 < th dose dependent rect. 2 19
110 73.45 wind 1.0 43200 > th dose independent rect. 22 12
120 73.51 humidity 90.0 43200 < th dose independent rect. 1 1
162 73.66 humidity 90.0 43200 > th dose independent rect. 21 9
174 73.71 humidity 80.0 43200 > th dose dependent sin 14 NA
180 73.73 humidity 90.0 43200 < th dose independent sin 12 NA
182 73.74 wind 1.0 43200 < th dose independent rect. 4 7
186 73.74 humidity 80.0 43200 > th dose dependent rect. 17 9
214 73.81 wind 1.0 43200 > th dose independent rect. 23 9
231 73.86 wind 1.0 43200 > th dose independent sin 7 NA
260 73.92 temperature 20.0 4320 < th dose dependent rect. 4 14
328 74.07 humidity 90.0 43200 > th dose dependent rect. 23 7
332 74.08 wind 1.0 43200 < th dose independent rect. 2 10
334 74.08 temperature 20.0 4320 < th dose dependent sin 1 NA
341 74.09 humidity 90.0 43200 > th dose dependent rect. 23 2
375 74.15 humidity 80.0 43200 > th dose independent rect. 24 19
399 74.19 wind 1.0 43200 < th dose independent rect. 2 13
429 74.25 humidity 80.0 43200 < th dose independent rect. 24 19
438 74.27 wind 1.0 43200 < th dose dependent sin 4 NA
483 74.31 wind 1.0 43200 < th dose dependent rect. 2 21
545 74.39 humidity 90.0 43200 > th dose independent sin 12 NA
584 74.44 humidity 90.0 43200 < th dose independent rect. 21 1
640 74.50 wind 9.0 43200 > th dose dependent rect. 4 1
728 74.61 humidity 80.0 43200 < th dose independent rect. 10 17
738 74.62 wind 1.0 4320 < th dose independent rect. 6 2
747 74.63 humidity 80.0 43200 < th dose independent rect. 11 15
784 74.67 humidity 50.0 43200 < th dose independent rect. 16 17
794 74.67 temperature 20.0 4320 < th dose dependent rect. 20 22
796 74.68 precipitation 0.1 43200 < th dose independent rect. 22 5
798 74.68 precipitation 0.1 43200 < th dose dependent rect. 22 5
811 74.69 temperature 20.0 4320 < th dose dependent no NA NA
827 74.70 humidity 70.0 43200 > th dose dependent rect. 22 21
831 74.71 precipitation 0.1 43200 > th dose independent rect. 22 5
833 74.71 humidity 80.0 43200 > th dose independent rect. 10 17
841 74.71 temperature 20.0 4320 < th dose dependent rect. 8 23
842 74.71 temperature 20.0 4320 < th dose dependent rect. 12 23
882 74.74 temperature 20.0 4320 < th dose dependent rect. 16 23
899 74.76 precipitation 0.1 43200 > th dose dependent rect. 22 5
966 74.82 wind 1.0 43200 < th dose independent rect. 22 21
975 74.83 humidity 80.0 43200 > th dose independent rect. 12 13
998 74.84 wind 1.0 43200 < th dose dependent rect. 23 20