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Os01g0388000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.33 (0.0751) R2 : 0.556
β1 : -3.33 (0.476) R2dD : 0.316 R2D : -0.372
β2 : 2.14 (0.129) R2dC : 0.261 R2C : 0.256
β3 : 1.88 (0.251) R2dE : 0.128 R2E : -0.0741
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -16.6 (1.81) R2dD*E : 0.552 R2D*E : -0.154
γ1 : 0.783 (0.142) R2dN8 : 0.0652 R2N8 : 0.11
σ : 0.962
deviance : 426.33
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_____
C
peak time of C : 3.27
E
wheather : temperature
threshold : 25.6
memory length : 4567
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
412.4 0.954 7.31 -3.09 2.07 1.7 2.15 -15.1 0.758 3.34 24.87 4535 -- --
483.32 1.03 6.85 0.555 2.32 0.992 2.25 -- 1.47 3.17 -8.082 47520 -- --
426.33 0.962 7.33 -3.33 2.14 1.88 -- -16.6 0.783 3.27 25.6 4567 -- --
489.47 1.03 6.89 0.154 2.01 0.979 -- -- 1.33 3.17 -19 8587 -- --
615.95 1.16 6.93 0.0183 -- -1.24 -- -10.1 1.48 -- 25.6 4567 -- --
492.57 1.04 6.82 0.742 2.05 -- 2.13 -- 1.61 3.28 -- -- -- --
507.04 1.05 6.83 0.701 2.05 -- -- -- 1.6 3.2 -- -- -- --
650.42 1.19 6.82 1.04 -- -2.08 -- -- 1.7 -- 25.8 15 -- --
489.71 1.03 6.91 -- 2.01 1.13 -- -- 1.25 3.22 7.5 8586 -- --
746.72 1.28 6.83 0.788 -- -- -- -- 1.65 -- -- -- -- --
519.99 1.07 6.85 -- 2.07 -- -- -- 1.52 3.2 -- -- -- --
660.57 1.2 6.85 -- -- -2.1 -- -- 1.55 -- 26.5 168 -- --
763.11 1.29 6.85 -- -- -- -- -- 1.56 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 400.16 precipitation 0.1 43200 > th dose independent rect. 8 1
2 400.16 precipitation 0.1 43200 > th dose dependent rect. 8 1
5 402.10 wind 3.0 43200 < th dose dependent rect. 21 1
6 402.89 precipitation 0.1 43200 < th dose independent rect. 8 2
7 402.89 precipitation 0.1 43200 < th dose dependent rect. 8 2
10 404.54 humidity 70.0 43200 < th dose independent rect. 17 3
13 404.84 humidity 70.0 43200 > th dose independent rect. 17 2
15 405.26 radiation 20.0 43200 < th dose independent rect. 13 1
18 405.94 humidity 70.0 43200 < th dose dependent rect. 8 10
19 405.95 humidity 70.0 43200 < th dose dependent rect. 8 14
25 406.11 humidity 70.0 43200 < th dose independent rect. 7 4
31 406.18 humidity 70.0 43200 < th dose dependent rect. 16 2
41 406.34 humidity 70.0 43200 < th dose dependent rect. 15 21
81 406.89 humidity 70.0 43200 < th dose dependent sin 22 NA
153 407.48 radiation 40.0 43200 > th dose independent rect. 13 1
158 407.52 humidity 80.0 43200 < th dose dependent rect. 8 3
178 407.65 temperature 20.0 720 > th dose dependent sin 7 NA
213 407.91 humidity 60.0 43200 > th dose independent rect. 19 22
217 407.94 humidity 70.0 43200 < th dose dependent rect. 19 23
220 407.98 humidity 70.0 43200 < th dose dependent no NA NA
231 408.04 humidity 70.0 43200 < th dose dependent rect. 21 23
268 408.36 radiation 10.0 43200 > th dose dependent rect. 13 1
279 408.46 humidity 60.0 43200 > th dose independent rect. 13 23
289 408.65 humidity 60.0 43200 > th dose independent rect. 8 21
291 408.67 radiation 40.0 43200 < th dose dependent rect. 13 1
313 408.87 humidity 60.0 43200 > th dose independent rect. 2 21
319 408.88 humidity 70.0 43200 > th dose independent rect. 6 5
320 408.88 humidity 60.0 43200 > th dose independent rect. 2 15
328 408.92 humidity 60.0 43200 > th dose independent rect. 4 23
341 408.96 humidity 60.0 43200 > th dose independent no NA NA
352 408.99 humidity 60.0 43200 > th dose independent rect. 11 23
376 409.09 temperature 25.0 43200 < th dose independent rect. 10 1
391 409.13 temperature 25.0 43200 > th dose independent rect. 10 1
401 409.16 humidity 60.0 43200 > th dose independent sin 17 NA
420 409.28 humidity 60.0 43200 > th dose independent rect. 11 14
422 409.29 humidity 60.0 43200 > th dose independent rect. 11 16
459 409.42 humidity 60.0 43200 > th dose independent rect. 16 23
496 409.61 humidity 70.0 43200 < th dose independent rect. 17 18
519 409.74 humidity 60.0 43200 > th dose independent sin 2 NA
543 409.85 humidity 60.0 43200 > th dose independent rect. 13 12
546 409.86 humidity 60.0 43200 > th dose independent rect. 13 10
560 409.93 humidity 60.0 43200 < th dose independent rect. 19 22
569 410.01 humidity 60.0 43200 > th dose independent rect. 13 14
606 410.27 humidity 60.0 43200 < th dose independent rect. 11 23
644 410.50 humidity 60.0 43200 < th dose independent sin 16 NA
672 410.65 radiation 20.0 43200 < th dose dependent rect. 8 1
677 410.69 humidity 60.0 43200 < th dose independent rect. 13 21
682 410.72 humidity 60.0 43200 < th dose independent rect. 11 18
700 410.82 humidity 70.0 43200 < th dose independent rect. 20 15
716 410.92 humidity 60.0 43200 < th dose independent rect. 13 14
722 410.95 humidity 60.0 43200 < th dose independent rect. 13 12
725 410.97 humidity 60.0 43200 < th dose independent rect. 13 10
726 410.97 radiation 20.0 43200 < th dose dependent rect. 7 4
746 411.06 humidity 60.0 43200 < th dose independent rect. 11 14
768 411.17 humidity 60.0 43200 < th dose independent rect. 8 21
776 411.22 humidity 60.0 43200 < th dose independent rect. 11 12
787 411.29 humidity 60.0 43200 > th dose independent rect. 11 6
789 411.29 humidity 60.0 43200 < th dose independent rect. 2 23
794 411.30 humidity 60.0 43200 < th dose independent rect. 24 23
798 411.32 humidity 60.0 43200 < th dose independent rect. 2 21
799 411.33 humidity 60.0 43200 < th dose independent no NA NA
823 411.40 humidity 60.0 43200 < th dose independent rect. 24 17
825 411.40 humidity 60.0 43200 < th dose independent rect. 4 23
845 411.46 radiation 10.0 43200 > th dose independent rect. 7 1
852 411.49 humidity 60.0 43200 < th dose independent rect. 2 15
868 411.56 radiation 10.0 43200 > th dose independent rect. 17 16
870 411.57 humidity 80.0 43200 > th dose independent rect. 11 3
874 411.59 radiation 10.0 43200 > th dose independent rect. 6 3
939 411.76 radiation 20.0 43200 > th dose independent rect. 7 9
957 411.80 humidity 60.0 43200 < th dose independent rect. 16 23
988 411.87 radiation 30.0 43200 < th dose dependent rect. 8 7