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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0386500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0154) R2 : 0.00413
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0446 (0.0324) R2dN8 : 0.00534 R2N8 : 0.00413
σ : 0.29
deviance : 38.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.14 0.286 3.1 -0.159 0.0727 0.795 -0.27 -4.05 -0.036 3.81 998.9 1405 -- --
37.33 0.285 3.06 0.0355 0.0721 0.457 -0.251 -- -0.0253 3.51 995.8 2829 -- --
37.24 0.284 3.1 -0.178 0.0873 0.85 -- -4.32 -0.0321 5.74 999.3 1276 -- --
37.38 0.285 3.06 0.0463 0.0856 0.397 -- -- -0.0361 5.92 995.8 2828 -- --
37.62 0.286 3.1 -0.178 -- 0.847 -- -4.35 -0.0317 -- 999.3 1271 -- --
38.11 0.289 3.06 0.0336 0.0821 -- -0.162 -- -0.0433 5.02 -- -- -- --
38.13 0.289 3.06 0.0344 0.0866 -- -- -- -0.0424 6.2 -- -- -- --
37.73 0.286 3.06 0.046 -- 0.401 -- -- -0.0306 -- 995.8 2828 -- --
37.42 0.285 3.06 -- 0.0848 0.39 -- -- -0.0351 5.99 995.8 2827 -- --
38.52 0.29 3.06 0.0368 -- -- -- -- -0.0405 -- -- -- -- --
38.16 0.289 3.06 -- 0.0871 -- -- -- -0.0462 6.18 -- -- -- --
37.79 0.286 3.06 -- -- 0.391 -- -- -0.0357 -- 995.8 2780 -- --
38.56 0.29 3.06 -- -- -- -- -- -0.0446 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.68 wind 9.0 4320 < th dose independent rect. 23 1
2 35.84 temperature 15.0 1440 > th dose independent rect. 23 1
3 35.98 atmosphere 995.0 4320 > th dose independent rect. 23 1
4 35.98 atmosphere 1000.0 10 > th dose independent rect. 24 11
6 36.03 temperature 15.0 30 > th dose independent rect. 23 23
7 36.05 wind 9.0 90 < th dose independent rect. 23 23
9 36.07 atmosphere 1015.0 90 < th dose independent rect. 22 1
11 36.10 temperature 25.0 30 > th dose dependent rect. 22 1
12 36.11 radiation 30.0 10 < th dose independent rect. 24 11
14 36.14 temperature 10.0 90 > th dose dependent rect. 22 1
15 36.14 humidity 90.0 30 < th dose dependent rect. 22 1
16 36.15 humidity 80.0 90 > th dose independent rect. 22 1
17 36.15 atmosphere 1005.0 30 > th dose independent rect. 22 1
21 36.16 temperature 25.0 30 > th dose independent rect. 22 1
25 36.16 temperature 30.0 1440 < th dose independent rect. 23 1
29 36.16 humidity 50.0 1440 > th dose independent rect. 23 1
39 36.16 humidity 90.0 30 < th dose independent rect. 22 1
41 36.16 radiation 1.0 1440 < th dose independent rect. 23 1
62 36.16 temperature 10.0 1440 > th dose independent rect. 24 23
66 36.16 atmosphere 1005.0 30 > th dose dependent rect. 22 1
67 36.16 radiation 1.0 1440 < th dose dependent rect. 23 1
72 36.17 wind 3.0 30 < th dose independent rect. 22 1
76 36.17 humidity 60.0 90 > th dose dependent rect. 22 1
77 36.17 atmosphere 995.0 30 > th dose dependent rect. 22 1
79 36.18 wind 1.0 30 > th dose independent rect. 22 1
85 36.18 temperature 10.0 30 > th dose independent rect. 22 1
87 36.18 temperature 30.0 30 < th dose independent rect. 22 1
88 36.18 humidity 50.0 30 > th dose independent rect. 22 1
95 36.18 radiation 1.0 30 < th dose independent rect. 22 1
100 36.18 precipitation 0.1 30 < th dose independent rect. 22 1
102 36.18 wind 5.0 30 < th dose dependent rect. 22 1
107 36.18 radiation 1.0 30 < th dose dependent rect. 22 1
112 36.18 precipitation 0.1 30 < th dose dependent rect. 22 1
119 36.20 atmosphere 995.0 90 > th dose independent rect. 23 23
127 36.21 wind 1.0 30 > th dose dependent rect. 22 1
149 36.22 atmosphere 1015.0 30 < th dose dependent rect. 22 1
161 36.24 temperature 30.0 30 < th dose dependent rect. 22 1
198 36.29 atmosphere 1015.0 10 < th dose independent rect. 11 13
201 36.29 radiation 40.0 10 < th dose dependent rect. 24 11
215 36.36 temperature 15.0 10 > th dose independent rect. 24 11
216 36.36 precipitation 0.1 10 < th dose independent rect. 11 13
218 36.36 precipitation 0.1 10 < th dose dependent rect. 11 13
222 36.38 wind 9.0 10 < th dose independent rect. 24 11
225 36.39 humidity 50.0 10 > th dose independent rect. 24 11
227 36.39 temperature 10.0 10 > th dose independent rect. 11 13
237 36.42 atmosphere 1015.0 10 < th dose independent rect. 24 11
243 36.44 temperature 10.0 1440 > th dose independent rect. 1 11
246 36.44 atmosphere 995.0 1440 > th dose independent rect. 1 11
247 36.44 temperature 10.0 1440 > th dose independent rect. 12 13
252 36.44 radiation 10.0 30 < th dose dependent rect. 23 23
261 36.47 radiation 40.0 30 < th dose independent rect. 11 13
274 36.49 humidity 50.0 10 > th dose dependent rect. 24 11
275 36.50 precipitation 0.1 30 < th dose independent rect. 24 11
276 36.50 wind 1.0 10 > th dose independent rect. 11 13
277 36.50 precipitation 0.1 90 < th dose independent rect. 23 23
278 36.50 temperature 25.0 30 > th dose dependent rect. 21 3
280 36.50 precipitation 0.1 30 < th dose dependent rect. 24 11
281 36.50 precipitation 0.1 90 < th dose dependent rect. 23 23
291 36.54 humidity 50.0 10 > th dose independent rect. 11 13
294 36.55 atmosphere 995.0 30 > th dose dependent rect. 24 11
297 36.56 wind 9.0 30 < th dose independent rect. 11 13
306 36.59 temperature 30.0 10 < th dose independent rect. 24 11
313 36.60 radiation 10.0 30 < th dose independent rect. 23 23
322 36.62 temperature 10.0 10 > th dose dependent rect. 24 11
331 36.64 temperature 15.0 270 > th dose independent rect. 23 20
342 36.65 atmosphere 1005.0 270 > th dose independent rect. 19 2
344 36.65 atmosphere 995.0 10 > th dose independent rect. 11 13
350 36.66 temperature 15.0 270 > th dose independent rect. 21 22
355 36.67 wind 1.0 30 > th dose independent rect. 24 11
356 36.67 wind 7.0 30 < th dose independent rect. 24 20
364 36.68 atmosphere 1000.0 10 > th dose independent rect. 24 20
368 36.68 temperature 10.0 10 > th dose dependent rect. 24 22
411 36.72 wind 3.0 720 > th dose independent rect. 11 2
416 36.72 atmosphere 1010.0 10 < th dose independent rect. 24 22
420 36.73 wind 5.0 270 < th dose independent rect. 19 4
425 36.73 temperature 10.0 270 > th dose dependent rect. 23 20
431 36.75 atmosphere 1015.0 270 < th dose independent rect. 19 4
432 36.75 radiation 40.0 270 < th dose independent rect. 19 17
435 36.75 wind 7.0 10 < th dose dependent rect. 20 4
438 36.75 temperature 10.0 30 > th dose dependent rect. 24 20
441 36.76 wind 5.0 270 < th dose independent rect. 19 2
442 36.76 humidity 90.0 270 < th dose independent rect. 19 2
445 36.76 atmosphere 1015.0 720 < th dose independent rect. 3 8
453 36.76 temperature 10.0 270 > th dose dependent rect. 19 4
460 36.77 atmosphere 1015.0 10 < th dose independent rect. 20 4
485 36.78 humidity 80.0 10 > th dose independent rect. 20 4
486 36.78 radiation 40.0 1440 < th dose independent rect. 16 5
487 36.78 humidity 50.0 720 > th dose independent rect. 3 8
493 36.78 humidity 50.0 720 > th dose independent rect. 23 16
496 36.78 atmosphere 1000.0 30 > th dose independent rect. 12 23
520 36.79 humidity 50.0 90 > th dose independent rect. 23 23
524 36.80 radiation 40.0 30 < th dose independent rect. 11 1
529 36.80 radiation 40.0 1440 < th dose independent rect. 16 7
535 36.81 radiation 10.0 720 > th dose independent rect. 8 1
538 36.81 wind 5.0 10 < th dose independent rect. 20 4
549 36.81 atmosphere 1010.0 10 < th dose independent rect. 24 20
556 36.81 humidity 60.0 10 > th dose dependent rect. 20 4
561 36.82 atmosphere 1005.0 10 > th dose independent rect. 20 4
575 36.82 temperature 10.0 10 > th dose dependent rect. 20 4
578 36.83 precipitation 0.1 1440 < th dose independent rect. 23 1
580 36.83 wind 1.0 270 > th dose independent rect. 19 4
583 36.83 wind 1.0 720 > th dose independent rect. 9 14
585 36.83 wind 1.0 30 > th dose independent rect. 24 22
586 36.83 temperature 15.0 90 > th dose independent rect. 12 23
587 36.83 precipitation 0.1 1440 < th dose dependent rect. 23 1
598 36.84 precipitation 0.1 270 < th dose independent rect. 19 4
600 36.84 humidity 50.0 1440 > th dose independent rect. 1 10
607 36.84 atmosphere 1000.0 720 > th dose independent rect. 21 14
613 36.84 wind 9.0 270 < th dose independent rect. 21 22
619 36.84 precipitation 0.1 270 < th dose dependent rect. 19 4
649 36.85 humidity 50.0 270 > th dose independent rect. 23 20
663 36.85 wind 9.0 270 < th dose dependent rect. 19 4
674 36.86 atmosphere 1015.0 270 < th dose independent rect. 19 2
683 36.86 radiation 40.0 90 < th dose independent rect. 21 15
687 36.86 temperature 25.0 720 > th dose dependent rect. 7 1
688 36.86 temperature 10.0 270 > th dose dependent rect. 19 2
690 36.86 wind 9.0 10 < th dose dependent rect. 24 11
700 36.87 temperature 10.0 270 > th dose independent rect. 19 4
701 36.87 temperature 30.0 270 < th dose independent rect. 19 4
702 36.87 humidity 50.0 270 > th dose independent rect. 19 4
703 36.87 atmosphere 995.0 270 > th dose independent rect. 19 4
704 36.87 radiation 1.0 270 < th dose independent rect. 19 4
716 36.87 precipitation 0.1 720 < th dose independent rect. 11 10
720 36.87 wind 1.0 30 > th dose independent rect. 24 20
727 36.87 radiation 1.0 270 < th dose dependent rect. 19 4
734 36.87 precipitation 0.1 720 < th dose dependent rect. 11 10
742 36.88 precipitation 0.1 270 < th dose independent rect. 19 2
752 36.88 wind 9.0 720 < th dose independent rect. 3 8
753 36.88 precipitation 0.1 720 < th dose independent rect. 15 8
759 36.88 temperature 15.0 10 > th dose independent rect. 24 20
764 36.88 precipitation 0.1 720 < th dose independent rect. 13 22
767 36.88 precipitation 0.1 270 < th dose dependent rect. 19 2
772 36.88 precipitation 0.1 720 < th dose dependent rect. 15 8
775 36.88 precipitation 0.1 720 < th dose dependent rect. 13 22
781 36.89 wind 1.0 270 > th dose independent rect. 19 2
826 36.89 temperature 10.0 10 > th dose independent rect. 20 4
827 36.89 temperature 30.0 10 < th dose independent rect. 20 4
828 36.89 humidity 50.0 10 > th dose independent rect. 20 4
831 36.89 atmosphere 995.0 10 > th dose independent rect. 20 4
832 36.89 radiation 1.0 10 < th dose independent rect. 20 4
837 36.89 precipitation 0.1 10 < th dose independent rect. 20 4
865 36.89 atmosphere 995.0 10 > th dose dependent rect. 20 4
866 36.89 radiation 1.0 10 < th dose dependent rect. 20 4
871 36.89 precipitation 0.1 10 < th dose dependent rect. 20 4
873 36.89 radiation 20.0 10 < th dose dependent rect. 24 20
895 36.90 radiation 40.0 1440 < th dose independent rect. 16 15
918 36.91 wind 1.0 10 > th dose independent rect. 20 4
932 36.91 humidity 50.0 30 > th dose independent rect. 24 20
948 36.91 radiation 1.0 270 < th dose dependent rect. 8 15
994 36.93 wind 1.0 30 > th dose independent rect. 11 1
996 36.93 temperature 10.0 270 > th dose independent rect. 19 2
997 36.93 temperature 30.0 270 < th dose independent rect. 19 2
998 36.93 humidity 50.0 270 > th dose independent rect. 19 2
999 36.93 atmosphere 995.0 270 > th dose independent rect. 19 2
1000 36.93 radiation 1.0 270 < th dose independent rect. 19 2