Os01g0385000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0385000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280.83 | 0.787 | 2.92 | 2.53e-05 | 0.0458 | -33.4 | 0.922 | 128 | -0.0105 | 8.14 | 0.493 | 10 | -- | -- |
| 281.07 | 0.787 | 3 | -0.273 | 0.0378 | 3.23 | 0.913 | -- | -0.00756 | 7.98 | 0.493 | 10 | -- | -- |
| 283.34 | 0.784 | 2.92 | 0.0243 | 0.047 | -33.1 | -- | 127 | -0.00993 | 10.3 | 0.4952 | 10 | -- | -- |
| 283.48 | 0.789 | 3 | -0.247 | 0.0459 | 3.3 | -- | -- | -0.00752 | 10.8 | 0.493 | 10 | -- | -- |
| 283.48 | 0.784 | 2.92 | 0.0243 | -- | -33.1 | -- | 127 | -0.00993 | -- | 0.4954 | 10 | -- | -- |
| 291.33 | 0.8 | 3 | -0.24 | 0.0485 | -- | 1.03 | -- | -0.0124 | 7.45 | -- | -- | -- | -- |
| 294.26 | 0.803 | 3 | -0.215 | 0.0503 | -- | -- | -- | -0.0139 | 8.41 | -- | -- | -- | -- |
| 283.61 | 0.788 | 3 | -0.248 | -- | 3.29 | -- | -- | -0.00782 | -- | 0.7757 | 10 | -- | -- |
| 285.08 | 0.791 | 3 | -- | 0.0476 | 3.24 | -- | -- | 0.0198 | 11.1 | 0.9992 | 10 | -- | -- |
| 294.4 | 0.802 | 3 | -0.215 | -- | -- | -- | -- | -0.0134 | -- | -- | -- | -- | -- |
| 295.48 | 0.804 | 3 | -- | 0.0495 | -- | -- | -- | 0.01 | 8.73 | -- | -- | -- | -- |
| 285.22 | 0.789 | 3 | -- | -- | 3.23 | -- | -- | 0.0195 | -- | 0.7239 | 11 | -- | -- |
| 295.62 | 0.803 | 3 | -- | -- | -- | -- | -- | 0.0104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.19 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 9 |
| 3 | 270.80 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 16 | 273.58 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 17 | 273.58 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 18 | 273.62 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 19 | 273.66 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 21 | 273.81 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 9 |
| 29 | 275.15 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 30 | 275.17 | temperature | 20.0 | 90 | < th | dose independent | rect. | 14 | 2 |
| 33 | 275.18 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 70 | 275.69 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 9 |
| 97 | 277.12 | temperature | 30.0 | 30 | > th | dose independent | rect. | 12 | 3 |
| 105 | 277.32 | temperature | 20.0 | 10 | < th | dose independent | rect. | 7 | 6 |
| 115 | 277.45 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 7 | 4 |
| 119 | 277.49 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 122 | 277.49 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 144 | 277.70 | wind | 3.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 146 | 277.73 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 148 | 277.73 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 204 | 278.66 | wind | 1.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 271 | 280.10 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 22 | 8 |
| 274 | 280.13 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 22 | 8 |
| 278 | 280.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 10 |
| 281 | 280.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 282 | 280.17 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 14 |
| 299 | 280.41 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 3 |
| 321 | 280.53 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 1 | 5 |
| 344 | 280.58 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 345 | 280.58 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 1 | 5 |
| 388 | 280.70 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 5 | NA |
| 422 | 280.83 | precipitation | 0.1 | 30 | > th | dose independent | sin | 5 | NA |
| 423 | 280.83 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 9 |
| 461 | 280.91 | precipitation | 0.1 | 30 | < th | dose independent | sin | 5 | NA |
| 462 | 280.91 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 5 | NA |
| 488 | 280.95 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 491 | 280.95 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 668 | 281.21 | temperature | 15.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 748 | 281.40 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 23 |
| 749 | 281.40 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 812 | 281.52 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 894 | 281.76 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 907 | 281.85 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 14 |
| 912 | 281.85 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 939 | 281.96 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 953 | 281.99 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 15 |
| 957 | 282.02 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 14 |
| 958 | 282.02 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 14 |
| 959 | 282.02 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 14 |
| 986 | 282.11 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 10 |
| 988 | 282.11 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 10 |
| 989 | 282.11 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 990 | 282.11 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 14 |
| 995 | 282.14 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 19 | 3 |