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Os01g0384800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0315) R2 : 0.632
β1 : 1.46 (0.116) R2dD : 0.137 R2D : 0.0832
β2 : 1.81 (0.0767) R2dC : 0.48 R2C : 0.36
β3 : -1.43 (0.106) R2dE : 0.164 R2E : 0.00837
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.267 (0.0674) R2dN8 : 0.0194 R2N8 : 0.0104
σ : 0.588
deviance : 159.18
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C
peak time of C : 23.3
E
wheather : temperature
threshold : 26.19
memory length : 654
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.7
open length of G : 3.33

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
158.42 0.591 10.7 1.01 1.87 -1.04 -0.0366 -3.35 0.329 23.3 25.27 655 18.7 2.3
160 0.589 10.6 1.41 1.82 -1.27 -0.00722 -- 0.275 23.2 26.19 665 18.7 2.8
158.25 0.586 10.6 1.08 1.87 -1.09 -- -3.04 0.324 23.2 25.58 650 18.7 2.3
159.18 0.588 10.6 1.46 1.81 -1.43 -- -- 0.267 23.3 26.19 654 18.7 3.33
330.54 0.847 10.6 1.1 -- -0.855 -- -1.81 0.457 -- 24.78 1177 19.4 2.08
214.73 0.687 10.6 1.28 1.65 -- -0.181 -- 0.397 22.3 -- -- -- --
214.86 0.686 10.6 1.29 1.65 -- -- -- 0.398 22.3 -- -- -- --
330.67 0.847 10.5 1.61 -- -1.09 -- -- 0.573 -- 24.57 1211 18.8 3.3
215.81 0.684 10.6 -- 1.8 -1.24 -- -- 0.198 23.2 26.14 633 18.9 3.08
381.27 0.912 10.6 1.31 -- -- -- -- 0.402 -- -- -- -- --
258.61 0.752 10.6 -- 1.66 -- -- -- 0.254 22.3 -- -- -- --
391.59 0.922 10.5 -- -- -0.986 -- -- 0.444 -- 25.04 1134 20.2 1.38
426.76 0.964 10.6 -- -- -- -- -- 0.256 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 160.96 temperature 25 720 > th dose dependent rect. 19 2
5 161.97 humidity 70 720 > th dose independent rect. 17 9
20 164.56 humidity 70 720 < th dose independent rect. 18 14
21 164.75 humidity 70 720 < th dose independent rect. 18 2
36 165.43 humidity 70 720 > th dose independent sin 13 NA
39 165.69 humidity 70 720 > th dose independent rect. 16 17
107 170.47 humidity 70 720 > th dose independent rect. 16 4
126 170.77 humidity 70 720 < th dose independent sin 13 NA
130 170.90 humidity 80 720 < th dose dependent rect. 18 2
196 172.80 temperature 30 720 < th dose independent rect. 16 10
279 174.76 temperature 30 720 < th dose independent rect. 16 17
283 174.94 temperature 25 720 > th dose dependent sin 13 NA
317 175.60 temperature 25 720 > th dose independent rect. 19 1
360 177.00 radiation 10 720 < th dose dependent rect. 16 9
455 178.19 temperature 30 720 < th dose independent rect. 16 3
656 179.57 humidity 50 720 > th dose dependent rect. 15 8
687 180.04 wind 7 43200 > th dose independent rect. 12 10
694 180.17 temperature 30 1440 < th dose independent sin 13 NA
700 180.20 wind 7 43200 < th dose independent rect. 10 12
748 180.48 wind 7 43200 > th dose dependent rect. 14 8
758 180.54 temperature 30 1440 > th dose independent sin 13 NA
799 180.63 radiation 10 720 < th dose dependent rect. 16 2
808 180.65 wind 7 43200 > th dose independent rect. 12 18
809 180.65 wind 7 43200 > th dose dependent rect. 17 4
818 180.69 wind 7 43200 > th dose independent sin 18 NA
822 180.70 wind 7 43200 < th dose independent rect. 12 18
856 180.76 wind 7 43200 < th dose independent sin 18 NA
879 180.82 wind 5 43200 > th dose dependent rect. 10 12
884 180.84 radiation 10 720 < th dose dependent rect. 14 4
886 180.85 radiation 1 43200 < th dose dependent rect. 21 4
904 180.90 wind 5 43200 > th dose dependent rect. 11 19
929 180.97 wind 5 43200 > th dose dependent rect. 10 15
961 181.05 wind 7 43200 < th dose independent rect. 3 18
966 181.07 wind 7 43200 < th dose independent rect. 5 17
975 181.10 wind 9 43200 > th dose independent rect. 17 4
990 181.10 wind 7 43200 > th dose independent rect. 3 18
996 181.11 wind 7 43200 < th dose independent rect. 24 21