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Os01g0383700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.021) R2 : 0.593
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.28 (0.05) R2dC : 0.585 R2C : 0.579
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.152 (0.0441) R2dN8 : 0.0136 R2N8 : 0.00729
σ : 0.395
deviance : 71.46
__
_____
C
peak time of C : 11.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.04 0.355 13.6 0.5 1.25 -0.575 0.78 -0.46 0.302 11.4 20.8 1293 -- --
57.5 0.353 13.6 0.588 1.26 -0.505 0.828 -- 0.321 11.4 21.1 1272 -- --
59.59 0.36 13.6 0.495 1.24 -0.578 -- -0.617 0.296 11.5 20.82 1244 -- --
60.39 0.362 13.6 0.626 1.25 -0.52 -- -- 0.327 11.4 20.84 1302 -- --
127.88 0.527 13.6 0.613 -- -0.978 -- -0.218 0.483 -- 25 832 -- --
64.33 0.376 13.6 0.376 1.28 -- 0.796 -- 0.194 11.5 -- -- -- --
67.06 0.383 13.6 0.409 1.28 -- -- -- 0.197 11.5 -- -- -- --
127.51 0.526 13.6 0.678 -- -0.992 -- -- 0.532 -- 25.2 836 -- --
67.86 0.384 13.6 -- 1.24 -0.284 -- -- 0.238 11.4 22.31 1143 -- --
170.04 0.609 13.6 0.374 -- -- -- -- 0.183 -- -- -- -- --
71.46 0.395 13.6 -- 1.28 -- -- -- 0.152 11.5 -- -- -- --
139.02 0.549 13.6 -- -- -0.887 -- -- 0.431 -- 25.11 835 -- --
173.74 0.615 13.7 -- -- -- -- -- 0.142 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.01 temperature 10.0 90 > th dose dependent rect. 18 11
2 52.22 temperature 10.0 720 > th dose dependent rect. 8 5
3 52.78 temperature 10.0 270 > th dose dependent rect. 8 13
19 54.23 temperature 10.0 270 > th dose dependent rect. 15 23
22 54.40 humidity 50.0 720 > th dose independent rect. 8 5
26 54.61 temperature 30.0 720 < th dose independent rect. 20 14
27 54.64 temperature 20.0 90 > th dose independent rect. 18 11
29 54.69 radiation 1.0 90 < th dose independent rect. 18 13
35 54.78 temperature 15.0 10 > th dose dependent rect. 9 13
37 54.81 temperature 10.0 90 > th dose independent rect. 18 11
38 54.81 humidity 50.0 90 > th dose independent rect. 18 11
39 54.81 radiation 20.0 90 < th dose independent rect. 18 11
42 54.81 temperature 10.0 90 > th dose independent rect. 5 13
43 54.81 atmosphere 1015.0 90 < th dose independent rect. 5 13
46 54.82 radiation 30.0 90 < th dose dependent rect. 18 11
49 54.84 wind 9.0 90 < th dose independent rect. 18 11
50 54.84 temperature 30.0 90 < th dose independent rect. 5 13
55 54.86 atmosphere 995.0 90 > th dose independent rect. 18 11
56 54.86 atmosphere 1015.0 90 < th dose independent rect. 18 11
60 54.92 temperature 20.0 30 > th dose dependent rect. 19 3
63 54.95 radiation 1.0 90 < th dose dependent rect. 18 14
78 55.10 atmosphere 995.0 90 > th dose dependent rect. 5 13
81 55.12 atmosphere 995.0 90 > th dose independent rect. 5 13
85 55.17 precipitation 0.1 90 < th dose independent rect. 5 13
86 55.17 precipitation 0.1 90 < th dose dependent rect. 5 13
93 55.24 wind 9.0 90 < th dose independent rect. 5 13
102 55.36 temperature 10.0 720 > th dose dependent rect. 1 3
109 55.41 temperature 30.0 10 < th dose dependent rect. 5 21
127 55.53 temperature 20.0 10 > th dose independent rect. 3 2
128 55.53 precipitation 0.1 720 < th dose independent rect. 19 22
129 55.53 precipitation 0.1 720 < th dose dependent rect. 19 22
133 55.58 humidity 50.0 720 > th dose independent rect. 17 20
152 55.67 temperature 15.0 90 > th dose dependent rect. 1 22
154 55.70 temperature 30.0 720 < th dose dependent rect. 5 2
172 55.78 temperature 10.0 720 > th dose dependent rect. 1 12
176 55.82 humidity 50.0 270 > th dose independent rect. 24 13
192 55.88 precipitation 0.1 90 < th dose independent rect. 18 11
194 55.88 precipitation 0.1 90 < th dose dependent rect. 18 11
195 55.88 temperature 15.0 90 > th dose dependent rect. 8 21
213 55.98 temperature 20.0 30 > th dose dependent rect. 19 1
220 56.00 temperature 15.0 90 > th dose dependent rect. 18 22
224 56.04 temperature 30.0 720 < th dose independent rect. 5 5
228 56.05 wind 5.0 720 < th dose independent rect. 5 2
235 56.07 precipitation 0.1 720 < th dose independent rect. 5 3
236 56.07 precipitation 0.1 720 < th dose dependent rect. 5 3
241 56.08 temperature 20.0 10 > th dose dependent rect. 8 21
243 56.10 radiation 20.0 720 < th dose independent rect. 17 3
245 56.10 temperature 15.0 10 > th dose dependent rect. 2 21
263 56.15 temperature 10.0 720 > th dose independent rect. 5 3
264 56.15 temperature 30.0 720 < th dose independent rect. 5 3
265 56.15 humidity 50.0 720 > th dose independent rect. 5 3
267 56.15 atmosphere 995.0 720 > th dose independent rect. 5 3
268 56.15 atmosphere 1015.0 720 < th dose independent rect. 5 3
269 56.15 temperature 10.0 720 > th dose independent rect. 8 21
279 56.19 temperature 10.0 720 > th dose independent rect. 17 3
280 56.19 atmosphere 1015.0 720 < th dose independent rect. 17 3
283 56.19 temperature 10.0 720 > th dose independent rect. 20 21
284 56.19 temperature 15.0 10 > th dose dependent rect. 3 2
296 56.24 wind 3.0 14400 > th dose independent rect. 1 1
302 56.25 temperature 10.0 720 > th dose dependent rect. 1 19
314 56.28 radiation 40.0 720 < th dose dependent rect. 17 3
320 56.30 temperature 20.0 270 > th dose independent rect. 8 12
323 56.32 radiation 40.0 720 < th dose independent rect. 5 3
326 56.33 temperature 30.0 30 < th dose independent rect. 18 11
332 56.34 temperature 25.0 90 > th dose independent rect. 18 4
342 56.35 temperature 10.0 720 > th dose dependent rect. 17 19
348 56.37 precipitation 0.1 720 < th dose independent rect. 5 20
352 56.37 precipitation 0.1 720 < th dose dependent rect. 5 20
362 56.40 wind 9.0 720 < th dose independent rect. 17 3
366 56.42 wind 3.0 14400 < th dose independent rect. 1 1
367 56.42 temperature 25.0 720 > th dose independent rect. 8 5
368 56.42 humidity 70.0 90 < th dose independent rect. 19 12
372 56.43 temperature 20.0 720 > th dose independent rect. 17 3
374 56.44 temperature 25.0 30 > th dose independent rect. 19 1
395 56.51 precipitation 0.1 720 < th dose independent rect. 4 13
399 56.51 precipitation 0.1 720 < th dose dependent rect. 4 13
402 56.53 wind 1.0 270 > th dose independent rect. 13 11
411 56.55 humidity 70.0 90 < th dose independent rect. 19 1
436 56.56 atmosphere 1015.0 90 < th dose dependent rect. 18 11
442 56.59 precipitation 0.1 720 < th dose independent rect. 13 4
444 56.59 precipitation 0.1 720 < th dose dependent rect. 13 4
452 56.61 precipitation 0.1 720 < th dose independent rect. 11 6
454 56.61 precipitation 0.1 720 < th dose dependent rect. 11 6
492 56.70 humidity 70.0 90 < th dose dependent rect. 19 12
500 56.72 temperature 20.0 30 > th dose independent rect. 1 4
530 56.77 wind 9.0 720 < th dose independent rect. 8 5
531 56.77 humidity 50.0 270 > th dose independent rect. 13 11
542 56.79 radiation 1.0 90 < th dose dependent rect. 1 22
546 56.80 wind 1.0 43200 > th dose dependent rect. 23 3
553 56.81 temperature 10.0 720 > th dose dependent rect. 17 3
563 56.83 wind 1.0 14400 > th dose dependent rect. 1 1
568 56.84 radiation 1.0 720 < th dose independent rect. 1 4
573 56.85 radiation 10.0 720 < th dose dependent rect. 1 4
579 56.86 humidity 50.0 90 > th dose independent rect. 5 12
581 56.87 precipitation 0.1 270 < th dose independent rect. 13 11
584 56.87 precipitation 0.1 270 < th dose dependent rect. 13 11
591 56.88 radiation 30.0 720 < th dose independent rect. 16 13
592 56.88 humidity 70.0 90 < th dose dependent rect. 19 1
608 56.88 atmosphere 995.0 30 > th dose dependent rect. 5 22
610 56.89 wind 9.0 720 < th dose independent rect. 8 21
611 56.90 wind 7.0 720 < th dose independent rect. 20 5
631 56.93 radiation 1.0 720 > th dose independent rect. 8 5
651 56.96 radiation 10.0 720 < th dose independent rect. 17 11
667 56.98 wind 1.0 90 > th dose independent rect. 5 13
679 56.99 atmosphere 995.0 720 > th dose independent rect. 17 3
680 56.99 temperature 10.0 720 > th dose independent rect. 1 4
681 56.99 temperature 30.0 720 < th dose independent rect. 1 4
682 56.99 humidity 50.0 720 > th dose independent rect. 1 4
685 56.99 atmosphere 995.0 720 > th dose independent rect. 1 4
690 56.99 temperature 10.0 720 > th dose independent rect. 5 20
708 57.01 precipitation 0.1 720 < th dose independent rect. 8 5
709 57.01 radiation 1.0 720 < th dose independent rect. 23 6
712 57.01 precipitation 0.1 720 < th dose dependent rect. 8 5
718 57.02 wind 9.0 720 < th dose independent rect. 1 4
721 57.02 radiation 10.0 720 < th dose dependent rect. 23 6
730 57.04 temperature 10.0 720 > th dose independent rect. 20 5
731 57.04 temperature 30.0 720 < th dose independent rect. 20 5
732 57.04 humidity 50.0 720 > th dose independent rect. 20 5
735 57.04 atmosphere 995.0 720 > th dose independent rect. 20 5
736 57.04 radiation 1.0 720 < th dose independent rect. 20 5
747 57.04 temperature 10.0 720 > th dose independent rect. 1 19
748 57.04 radiation 1.0 720 < th dose dependent rect. 20 5
754 57.05 precipitation 0.1 720 < th dose independent rect. 17 2
755 57.05 temperature 10.0 720 > th dose independent rect. 13 4
756 57.05 atmosphere 1015.0 720 < th dose independent rect. 13 4
757 57.05 temperature 10.0 720 > th dose independent rect. 17 20
758 57.05 wind 9.0 720 < th dose dependent rect. 5 2
759 57.05 precipitation 0.1 720 < th dose dependent rect. 17 2
760 57.05 atmosphere 995.0 720 > th dose dependent rect. 5 3
771 57.06 atmosphere 995.0 720 > th dose independent rect. 8 5
772 57.06 atmosphere 1015.0 720 < th dose independent rect. 8 5
775 57.06 wind 9.0 270 < th dose independent rect. 24 13
776 57.06 temperature 10.0 720 > th dose independent rect. 13 19
777 57.06 precipitation 0.1 720 < th dose independent rect. 13 19
780 57.06 precipitation 0.1 720 < th dose dependent rect. 13 19
799 57.08 temperature 10.0 720 > th dose independent rect. 5 12
800 57.08 temperature 10.0 720 > th dose independent rect. 17 12
801 57.08 atmosphere 1015.0 720 < th dose independent rect. 5 12
816 57.09 wind 9.0 14400 < th dose dependent rect. 1 1
819 57.09 temperature 30.0 720 < th dose dependent rect. 5 11
827 57.10 radiation 40.0 720 < th dose dependent rect. 17 11
829 57.10 radiation 10.0 90 < th dose dependent rect. 15 14
849 57.12 wind 9.0 90 < th dose dependent rect. 18 11
860 57.13 temperature 30.0 10 < th dose dependent rect. 14 12
864 57.14 humidity 50.0 720 > th dose independent rect. 17 3
865 57.14 humidity 50.0 720 > th dose independent rect. 19 22
882 57.16 temperature 10.0 720 > th dose independent rect. 11 6
883 57.16 temperature 10.0 720 > th dose independent rect. 23 6
884 57.16 temperature 30.0 720 < th dose independent rect. 23 6
885 57.16 humidity 50.0 720 > th dose independent rect. 23 6
888 57.16 atmosphere 995.0 720 > th dose independent rect. 23 6
889 57.16 atmosphere 1015.0 720 < th dose independent rect. 11 6
894 57.16 temperature 10.0 720 > th dose independent rect. 5 18
895 57.16 temperature 10.0 720 > th dose independent rect. 17 18
896 57.16 atmosphere 1015.0 720 < th dose independent rect. 1 19
898 57.16 temperature 30.0 90 < th dose dependent rect. 13 12
916 57.19 wind 9.0 720 < th dose independent rect. 23 6
953 57.23 temperature 30.0 10 < th dose dependent rect. 12 14
960 57.24 atmosphere 1015.0 270 < th dose independent rect. 24 13
970 57.25 temperature 10.0 270 > th dose independent rect. 13 11
972 57.25 temperature 10.0 270 > th dose independent rect. 24 13
973 57.25 atmosphere 995.0 270 > th dose independent rect. 24 13
981 57.26 temperature 20.0 1440 > th dose independent rect. 22 8
990 57.27 temperature 20.0 1440 > th dose independent rect. 23 5