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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0377000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : E-class P450, group I family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.63 (0.0371) R2 : 0.229
β1 : 0.912 (0.137) R2dD : 0.0794 R2D : -0.0275
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.852 (0.125) R2dE : 0.0822 R2E : -0.015
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.756 (0.0802) R2dN8 : 0.207 R2N8 : 0.0844
σ : 0.692
deviance : 220.95
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 72.47
memory length : 1616
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
202.61 0.669 3.67 0.903 0.858 1.15 1.21 0.533 0.694 22.2 73 752 -- --
202.9 0.663 3.67 0.935 0.857 1.16 1.04 -- 0.703 22.3 72.71 747 -- --
207.68 0.671 3.67 0.921 0.859 1.19 -- 0.158 0.7 22.2 75 772 -- --
206.94 0.67 3.66 0.911 0.878 1.14 -- -- 0.708 22.7 74.44 790 -- --
220.1 0.691 3.64 0.801 -- 0.815 -- 0.831 0.729 -- 73.11 1605 -- --
225.28 0.704 3.66 0.79 0.51 -- 0.719 -- 0.657 1.02 -- -- -- --
227.23 0.706 3.66 0.762 0.516 -- -- -- 0.652 1.49 -- -- -- --
220.95 0.692 3.63 0.912 -- 0.852 -- -- 0.756 -- 72.47 1616 -- --
226.85 0.701 3.69 -- 0.803 0.966 -- -- 0.604 22.6 74.23 728 -- --
243.56 0.729 3.65 0.783 -- -- -- -- 0.663 -- -- -- -- --
242.56 0.729 3.68 -- 0.529 -- -- -- 0.567 1.54 -- -- -- --
242.13 0.725 3.66 -- -- 0.758 -- -- 0.648 -- 74.11 1667 -- --
259.73 0.752 3.67 -- -- -- -- -- 0.577 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 196.35 wind 1 90 < th dose independent rect. 16 2
4 197.05 wind 1 90 < th dose dependent rect. 16 2
12 202.35 humidity 70 720 > th dose independent rect. 13 22
14 202.69 humidity 70 720 > th dose independent rect. 9 18
15 202.83 humidity 70 720 > th dose independent sin 19 NA
16 202.84 humidity 70 720 > th dose independent rect. 9 16
37 203.50 humidity 70 720 > th dose independent rect. 9 23
39 203.52 humidity 70 720 > th dose independent rect. 6 23
42 203.57 humidity 70 720 > th dose independent rect. 6 21
49 203.68 humidity 70 720 > th dose independent rect. 13 14
52 203.79 humidity 70 720 > th dose independent rect. 13 16
57 203.87 humidity 70 720 > th dose independent rect. 13 8
79 204.16 humidity 70 720 > th dose independent rect. 17 23
87 204.24 humidity 70 720 > th dose independent rect. 4 23
90 204.31 humidity 70 720 > th dose independent no NA NA
106 204.59 humidity 70 720 > th dose independent rect. 22 23
112 204.74 humidity 80 720 < th dose independent rect. 8 14
116 204.77 humidity 70 720 > th dose independent rect. 2 23
127 204.94 humidity 70 720 < th dose independent rect. 13 22
163 205.33 humidity 70 720 > th dose independent rect. 19 23
197 205.74 humidity 70 720 < th dose independent rect. 17 23
204 205.76 humidity 80 720 < th dose independent rect. 10 12
210 205.77 humidity 60 720 > th dose dependent rect. 9 15
216 205.83 humidity 70 720 < th dose independent rect. 10 10
265 205.95 humidity 70 720 < th dose independent sin 19 NA
291 206.06 humidity 80 720 < th dose independent sin 21 NA
322 206.08 humidity 70 1440 > th dose independent rect. 3 18
425 206.28 humidity 70 720 < th dose independent no NA NA
484 206.29 humidity 60 720 > th dose dependent sin 19 NA
521 206.44 humidity 70 720 < th dose independent rect. 13 7
789 207.07 humidity 70 1440 > th dose dependent rect. 7 8
861 207.20 humidity 70 720 > th dose dependent rect. 6 17
902 207.30 humidity 60 720 > th dose dependent rect. 13 8
907 207.31 humidity 70 14400 < th dose independent rect. 18 1
915 207.33 humidity 60 720 > th dose dependent rect. 11 10
990 207.53 humidity 60 1440 > th dose dependent sin 1 NA