Os01g0376200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Non-protein coding transcript, unclassifiable transcript.
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Os01g0376200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Non-protein coding transcript, unclassifiable transcript.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.04 | 0.519 | 3.61 | -0.795 | 0.199 | -0.537 | 1.33 | -2.17 | 0.135 | 19.7 | 69.01 | 5311 | -- | -- |
| 127.79 | 0.526 | 3.62 | -0.704 | 0.216 | -0.684 | 1.11 | -- | 0.139 | 19.3 | 68.12 | 5384 | -- | -- |
| 124.76 | 0.52 | 3.61 | -0.819 | 0.264 | -0.415 | -- | -2.08 | 0.137 | 16.5 | 69 | 5843 | -- | -- |
| 129.39 | 0.53 | 3.57 | -0.716 | 0.22 | -0.624 | -- | -- | 0.31 | 16.5 | 75 | 5433 | -- | -- |
| 128.15 | 0.527 | 3.6 | -0.834 | -- | -0.46 | -- | -2.08 | 0.137 | -- | 69.71 | 5664 | -- | -- |
| 134.51 | 0.544 | 3.62 | -0.691 | 0.206 | -- | 1.08 | -- | 0.105 | 18.8 | -- | -- | -- | -- |
| 135.8 | 0.546 | 3.62 | -0.703 | 0.273 | -- | -- | -- | 0.111 | 16.3 | -- | -- | -- | -- |
| 132.57 | 0.536 | 3.56 | -0.74 | -- | -0.687 | -- | -- | 0.328 | -- | 74 | 5465 | -- | -- |
| 143.45 | 0.558 | 3.56 | -- | 0.262 | -0.57 | -- | -- | 0.37 | 16.3 | 75 | 5436 | -- | -- |
| 139.82 | 0.553 | 3.62 | -0.714 | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
| 148.85 | 0.571 | 3.6 | -- | 0.286 | -- | -- | -- | 0.189 | 16.3 | -- | -- | -- | -- |
| 146.96 | 0.565 | 3.55 | -- | -- | -0.668 | -- | -- | 0.432 | -- | 76 | 5456 | -- | -- |
| 153.28 | 0.578 | 3.6 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 117.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 118.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 4 | 118.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 5 | 118.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 6 | 118.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 7 | 118.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 8 | 118.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 119.41 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 14 | 120.41 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 18 | 120.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 19 | 120.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 33 | 120.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 34 | 120.88 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 56 | 121.13 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 64 | 121.20 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 71 | 121.24 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 73 | 121.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 88 | 121.37 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 99 | 121.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 100 | 121.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 108 | 121.47 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 128 | 121.56 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 137 | 121.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 158 | 121.71 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 159 | 121.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 174 | 121.81 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 179 | 121.83 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 183 | 121.86 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 208 | 121.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 228 | 122.02 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 272 | 122.21 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 289 | 122.27 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 291 | 122.27 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 303 | 122.30 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 309 | 122.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 314 | 122.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 322 | 122.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 325 | 122.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 404 | 122.58 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 410 | 122.60 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 418 | 122.64 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 422 | 122.65 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 425 | 122.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 438 | 122.72 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 441 | 122.72 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 445 | 122.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 451 | 122.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 454 | 122.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 462 | 122.76 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 463 | 122.76 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 472 | 122.78 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 7 | 9 |
| 485 | 122.78 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 509 | 122.81 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 522 | 122.81 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 551 | 122.89 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 558 | 122.90 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 560 | 122.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 567 | 122.91 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 582 | 122.93 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 12 |
| 586 | 122.95 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 588 | 122.95 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 626 | 122.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 643 | 123.01 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 648 | 123.03 | humidity | 70.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 712 | 123.12 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 740 | 123.14 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 2 | 14 |
| 753 | 123.15 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 827 | 123.22 | humidity | 70.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 829 | 123.22 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 871 | 123.27 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 886 | 123.29 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 889 | 123.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 890 | 123.29 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 913 | 123.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 921 | 123.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 924 | 123.33 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 942 | 123.34 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 964 | 123.37 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 4 |