Os01g0375100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to DnAJ-like protein slr0093.
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Os01g0375100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to DnAJ-like protein slr0093.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.03 | 0.194 | 9.34 | 1.05 | 0.295 | 0.644 | 0.155 | -0.954 | 0.0705 | 12.7 | 24.68 | 1250 | -- | -- |
| 16.68 | 0.19 | 9.37 | 0.801 | 0.383 | 0.578 | 0.0349 | -- | -0.0242 | 13.3 | 22.4 | 1964 | -- | -- |
| 17.13 | 0.193 | 9.34 | 1.04 | 0.299 | 0.644 | -- | -0.917 | 0.0691 | 12.6 | 24.7 | 1256 | -- | -- |
| 16.66 | 0.19 | 9.37 | 0.772 | 0.395 | 0.559 | -- | -- | -0.0351 | 13.1 | 22.44 | 1764 | -- | -- |
| 19.9 | 0.208 | 9.34 | 1.03 | -- | 0.735 | -- | -0.882 | 0.0955 | -- | 24.75 | 1020 | -- | -- |
| 29.08 | 0.253 | 9.42 | 0.557 | 0.4 | -- | 0.0722 | -- | -0.236 | 13.1 | -- | -- | -- | -- |
| 29.1 | 0.253 | 9.42 | 0.56 | 0.4 | -- | -- | -- | -0.235 | 13.1 | -- | -- | -- | -- |
| 21.74 | 0.217 | 9.37 | 0.843 | -- | 0.743 | -- | -- | 0.0926 | -- | 24.8 | 1020 | -- | -- |
| 30.7 | 0.258 | 9.41 | -- | 0.361 | 0.379 | -- | -- | -0.169 | 12.9 | 22.8 | 1368 | -- | -- |
| 39.05 | 0.292 | 9.43 | 0.545 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 37.37 | 0.286 | 9.43 | -- | 0.391 | -- | -- | -- | -0.298 | 13 | -- | -- | -- | -- |
| 35.93 | 0.279 | 9.39 | -- | -- | 0.54 | -- | -- | -0.115 | -- | 25 | 990 | -- | -- |
| 46.88 | 0.32 | 9.44 | -- | -- | -- | -- | -- | -0.304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 16 |
| 8 | 17.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 20 | 17.10 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 22 | 17.12 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 26 | 17.13 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 52 | 17.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 11 |
| 60 | 17.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 66 | 17.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 78 | 17.22 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 79 | 17.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 119 | 17.25 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 147 | 17.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 148 | 17.27 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 17 |
| 186 | 17.29 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 242 | 17.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 259 | 17.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 261 | 17.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 280 | 17.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 336 | 17.36 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 337 | 17.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 354 | 17.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 376 | 17.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 473 | 17.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 540 | 17.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 20 |
| 558 | 17.44 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 581 | 17.45 | temperature | 25 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 615 | 17.46 | temperature | 25 | 1440 | < th | dose independent | rect. | 21 | 23 |
| 682 | 17.48 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 721 | 17.49 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 766 | 17.50 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 797 | 17.51 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 865 | 17.52 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 866 | 17.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 23 |