Os01g0372400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os01g0372400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.51 | 0.574 | 9.34 | 0.823 | 0.964 | 0.0707 | 0.54 | -4.16 | 0.0291 | 1.32 | 24.54 | 1321 | -- | -- |
| 154.3 | 0.579 | 9.23 | 1.93 | 1.01 | -0.287 | 0.353 | -- | 0.267 | 1.37 | 33.8 | 1877 | -- | -- |
| 150.5 | 0.571 | 9.34 | 0.849 | 0.956 | 0.0452 | -- | -3.71 | 0.0307 | 1.4 | 23.92 | 1382 | -- | -- |
| 152.91 | 0.576 | 9.23 | 1.92 | 0.973 | -0.678 | -- | -- | 0.218 | 1.29 | 34.97 | 1979 | -- | -- |
| 187.27 | 0.641 | 9.19 | 1.87 | -- | -0.932 | -- | -1.08 | 0.382 | -- | 23.19 | 3133 | -- | -- |
| 160.68 | 0.594 | 9.22 | 1.83 | 0.922 | -- | 0.288 | -- | 0.278 | 1.28 | -- | -- | -- | -- |
| 161.01 | 0.594 | 9.22 | 1.82 | 0.923 | -- | -- | -- | 0.276 | 1.33 | -- | -- | -- | -- |
| 188.07 | 0.642 | 9.17 | 2.02 | -- | -1.01 | -- | -- | 0.43 | -- | 23.19 | 3133 | -- | -- |
| 246.27 | 0.731 | 9.25 | -- | 0.954 | -0.285 | -- | -- | 0.0705 | 1.13 | 35.2 | 965 | -- | -- |
| 213.51 | 0.683 | 9.2 | 1.86 | -- | -- | -- | -- | 0.295 | -- | -- | -- | -- | -- |
| 248.35 | 0.737 | 9.26 | -- | 0.955 | -- | -- | -- | 0.0732 | 1.4 | -- | -- | -- | -- |
| 234.29 | 0.713 | 9.34 | -- | -- | 1.35 | -- | -- | -0.314 | -- | 7.296 | 47520 | -- | -- |
| 304.43 | 0.814 | 9.25 | -- | -- | -- | -- | -- | 0.0892 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.52 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 2 | 146.64 | radiation | 30 | 270 | > th | dose dependent | rect. | 14 | 2 |
| 18 | 146.72 | radiation | 20 | 270 | < th | dose independent | sin | 14 | NA |
| 19 | 146.80 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 20 | 146.82 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 17 |
| 42 | 147.13 | radiation | 10 | 90 | < th | dose independent | rect. | 5 | 22 |
| 43 | 147.17 | radiation | 10 | 270 | > th | dose dependent | sin | 14 | NA |
| 45 | 147.32 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 60 | 147.42 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 63 | 147.46 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 64 | 147.49 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 17 |
| 84 | 147.65 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 85 | 147.68 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 88 | 147.71 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 104 | 147.84 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 115 | 148.08 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 145 | 148.34 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 162 | 148.36 | radiation | 40 | 270 | > th | dose independent | rect. | 14 | 1 |
| 183 | 148.39 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 203 | 148.42 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 15 |
| 208 | 148.47 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 217 | 148.52 | radiation | 20 | 270 | > th | dose independent | sin | 15 | NA |
| 227 | 148.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 228 | 148.60 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 245 | 148.65 | radiation | 40 | 270 | < th | dose dependent | sin | 15 | NA |
| 252 | 148.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 264 | 148.77 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 277 | 148.77 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 12 |
| 288 | 148.80 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 294 | 148.83 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 297 | 148.84 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 304 | 148.88 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 305 | 148.88 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 309 | 148.90 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 317 | 148.95 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 325 | 148.97 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 330 | 148.99 | humidity | 70 | 270 | < th | dose independent | rect. | 14 | 2 |
| 333 | 148.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 10 |
| 336 | 149.00 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 346 | 149.04 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 351 | 149.05 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 352 | 149.05 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 358 | 149.07 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 374 | 149.11 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 17 | 10 |
| 380 | 149.13 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 385 | 149.14 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 390 | 149.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 396 | 149.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 12 |
| 414 | 149.19 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 478 | 149.23 | temperature | 25 | 1440 | > th | dose dependent | sin | 13 | NA |
| 565 | 149.34 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 572 | 149.35 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 624 | 149.37 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 655 | 149.42 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 664 | 149.43 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 703 | 149.47 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 19 | 8 |
| 706 | 149.48 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 13 |
| 708 | 149.48 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 713 | 149.49 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 717 | 149.49 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 729 | 149.50 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 22 | 13 |
| 750 | 149.52 | humidity | 80 | 270 | < th | dose dependent | rect. | 13 | 3 |
| 753 | 149.53 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 754 | 149.53 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 771 | 149.53 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 787 | 149.54 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 832 | 149.55 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 870 | 149.58 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 8 | NA |
| 871 | 149.58 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 8 | NA |
| 874 | 149.58 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 1 | 10 |
| 876 | 149.58 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 897 | 149.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 901 | 149.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 955 | 149.62 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 967 | 149.62 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 16 | 14 |