Os01g0371800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os01g0371800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.63 | 0.44 | 2.85 | -0.162 | 0.141 | 1.37 | -0.361 | -4.05 | 0.0497 | 14.6 | 0.7 | 29 | -- | -- |
| 90.76 | 0.444 | 2.84 | -0.118 | 0.139 | 1.09 | -0.122 | -- | 0.0373 | 14.1 | 0.1 | 24 | -- | -- |
| 88.02 | 0.437 | 2.85 | -0.169 | 0.143 | 1.45 | -- | -3.92 | 0.0456 | 14.6 | 0.6428 | 26 | -- | -- |
| 90.47 | 0.443 | 2.84 | -0.109 | 0.144 | 1.1 | -- | -- | 0.0396 | 13.8 | 0.08855 | 20 | -- | -- |
| 88.63 | 0.438 | 2.86 | -0.186 | -- | 1.36 | -- | -4.19 | 0.0323 | -- | 0.09996 | 27 | -- | -- |
| 99.1 | 0.467 | 2.84 | -0.0501 | 0.068 | -- | -0.229 | -- | 0.0195 | 12 | -- | -- | -- | -- |
| 99.28 | 0.467 | 2.84 | -0.06 | 0.0745 | -- | -- | -- | 0.0179 | 10.5 | -- | -- | -- | -- |
| 91.58 | 0.446 | 2.84 | -0.112 | -- | 1.03 | -- | -- | 0.0357 | -- | 0.08812 | 20 | -- | -- |
| 90.79 | 0.444 | 2.84 | -- | 0.139 | 1.1 | -- | -- | 0.0524 | 13.8 | 0.09436 | 20 | -- | -- |
| 99.62 | 0.466 | 2.85 | -0.0613 | -- | -- | -- | -- | 0.0175 | -- | -- | -- | -- | -- |
| 99.38 | 0.466 | 2.84 | -- | 0.0749 | -- | -- | -- | 0.0245 | 10.6 | -- | -- | -- | -- |
| 91.91 | 0.447 | 2.84 | -- | -- | 1.01 | -- | -- | 0.0478 | -- | 0.09261 | 20 | -- | -- |
| 99.72 | 0.466 | 2.84 | -- | -- | -- | -- | -- | 0.0243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.83 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 2 |
| 5 | 82.80 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 2 |
| 7 | 83.66 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 16 | 84.56 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 14 |
| 23 | 85.20 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 22 |
| 30 | 86.44 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 7 |
| 52 | 87.87 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 14 |
| 58 | 87.89 | wind | 1 | 30 | < th | dose dependent | sin | 3 | NA |
| 68 | 88.16 | wind | 1 | 30 | < th | dose dependent | rect. | 23 | 8 |
| 85 | 88.40 | wind | 1 | 30 | < th | dose dependent | rect. | 10 | 21 |
| 87 | 88.42 | wind | 1 | 30 | < th | dose dependent | rect. | 1 | 6 |
| 96 | 88.58 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 22 |
| 218 | 89.26 | wind | 1 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 238 | 89.29 | wind | 1 | 30 | < th | dose dependent | no | NA | NA |
| 329 | 90.69 | wind | 1 | 30 | < th | dose independent | sin | 3 | NA |
| 378 | 91.52 | wind | 1 | 30 | < th | dose independent | rect. | 23 | 8 |
| 384 | 91.55 | wind | 1 | 30 | < th | dose independent | rect. | 1 | 6 |
| 420 | 91.77 | wind | 1 | 30 | < th | dose independent | rect. | 10 | 21 |
| 584 | 92.33 | wind | 1 | 30 | < th | dose independent | rect. | 1 | 23 |
| 587 | 92.34 | wind | 1 | 30 | < th | dose independent | no | NA | NA |
| 750 | 93.02 | wind | 1 | 30 | > th | dose independent | sin | 2 | NA |
| 855 | 93.72 | wind | 1 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 857 | 93.74 | wind | 1 | 30 | > th | dose independent | rect. | 13 | 23 |
| 867 | 93.81 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 884 | 93.88 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 915 | 94.05 | atmosphere | 1015 | 30 | < th | dose independent | rect. | 11 | 23 |
| 936 | 94.21 | humidity | 50 | 10 | < th | dose independent | rect. | 17 | 19 |
| 943 | 94.26 | wind | 1 | 270 | < th | dose independent | rect. | 21 | 9 |
| 947 | 94.28 | humidity | 50 | 10 | < th | dose independent | sin | 8 | NA |
| 958 | 94.33 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 973 | 94.33 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |