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Os01g0371200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutathione-S-transferase 19E50.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0367) R2 : 0.626
β1 : 0.957 (0.145) R2dD : 0.0367 R2D : -0.0183
β2 : 2.43 (0.0922) R2dC : 0.557 R2C : 0.56
β3 : -1.16 (0.143) R2dE : 0.0715 R2E : 0.0297
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0996 (0.0789) R2dN8 : 0.00174 R2N8 : -0.00159
σ : 0.682
deviance : 214.66
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_____
C
peak time of C : 8.29
E
wheather : precipitation
threshold : 0.733
memory length : 15232
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
198.92 0.663 10.9 0.63 2.4 0.0451 1.79 -5.14 0.152 8.3 0.1727 4839 -- --
207.55 0.671 10.8 0.999 2.44 -1.09 1.79 -- 0.181 8.17 0.5019 15134 -- --
208.77 0.673 10.9 0.673 2.39 0.0475 -- -5.18 0.15 8.22 0.1989 4839 -- --
214.66 0.682 10.8 0.957 2.43 -1.16 -- -- 0.0996 8.29 0.733 15232 -- --
525.83 1.07 10.9 0.661 -- 0.0592 -- -5.17 0.198 -- 0.2706 4839 -- --
236 0.72 10.7 0.363 2.4 -- 1.82 -- 0.183 8.37 -- -- -- --
246.3 0.735 10.8 0.416 2.41 -- -- -- 0.181 8.29 -- -- -- --
530.95 1.07 10.8 0.927 -- -1.27 -- -- 0.0986 -- 0.7694 14776 -- --
228.11 0.703 10.8 -- 2.45 -0.886 -- -- 0.0333 8.21 0.3257 15351 -- --
567.09 1.11 10.8 0.432 -- -- -- -- 0.208 -- -- -- -- --
250.86 0.741 10.8 -- 2.41 -- -- -- 0.135 8.28 -- -- -- --
547.83 1.09 10.8 -- -- -0.92 -- -- 0.0407 -- 0.3767 14774 -- --
572.01 1.12 10.8 -- -- -- -- -- 0.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 186.03 wind 9.0 43200 < th dose independent rect. 13 2
2 186.12 wind 7.0 43200 > th dose dependent rect. 13 4
3 186.13 wind 9.0 43200 > th dose independent rect. 13 2
4 186.44 wind 9.0 43200 > th dose dependent rect. 13 2
17 187.93 wind 7.0 43200 > th dose independent rect. 12 5
26 188.61 wind 7.0 43200 < th dose independent rect. 12 6
70 190.86 humidity 80.0 43200 < th dose dependent rect. 22 1
91 191.40 humidity 80.0 43200 < th dose dependent rect. 21 5
96 191.49 humidity 80.0 14400 < th dose independent rect. 22 1
101 191.57 humidity 80.0 1440 < th dose independent rect. 7 7
112 191.85 precipitation 0.1 14400 > th dose dependent rect. 3 2
135 192.21 humidity 80.0 43200 > th dose independent rect. 24 1
140 192.31 humidity 80.0 43200 < th dose independent rect. 24 1
152 192.49 atmosphere 995.0 43200 > th dose independent rect. 22 21
160 192.54 atmosphere 995.0 43200 > th dose independent rect. 5 23
161 192.54 atmosphere 995.0 43200 > th dose independent rect. 7 23
167 192.55 radiation 40.0 43200 > th dose dependent rect. 10 1
172 192.62 atmosphere 995.0 43200 > th dose independent no NA NA
185 192.70 atmosphere 995.0 43200 < th dose independent rect. 8 21
200 192.82 atmosphere 995.0 43200 < th dose independent rect. 13 23
205 192.84 atmosphere 995.0 43200 < th dose independent rect. 9 19
209 192.84 radiation 40.0 43200 > th dose dependent rect. 7 4
241 192.93 atmosphere 995.0 43200 < th dose independent no NA NA
243 192.93 atmosphere 995.0 43200 < th dose independent rect. 21 22
279 193.21 humidity 60.0 14400 < th dose independent rect. 15 1
280 193.21 humidity 80.0 1440 > th dose independent rect. 7 7
305 193.35 atmosphere 995.0 43200 > th dose independent rect. 15 23
309 193.39 atmosphere 995.0 43200 > th dose independent rect. 9 18
311 193.40 atmosphere 995.0 43200 > th dose independent rect. 13 23
318 193.43 radiation 1.0 1440 < th dose dependent rect. 7 10
331 193.57 humidity 80.0 43200 > th dose independent rect. 24 5
347 193.70 radiation 40.0 43200 < th dose independent sin 11 NA
394 193.89 radiation 40.0 43200 < th dose independent rect. 15 20
407 193.94 precipitation 0.1 14400 < th dose independent rect. 3 2
408 193.94 precipitation 0.1 14400 < th dose dependent rect. 3 2
418 194.03 precipitation 0.1 14400 > th dose independent rect. 3 2
425 194.06 radiation 40.0 43200 > th dose dependent sin 11 NA
438 194.14 wind 7.0 14400 > th dose independent rect. 5 10
457 194.25 humidity 80.0 43200 > th dose independent rect. 4 1
464 194.29 wind 7.0 14400 > th dose independent rect. 20 18
477 194.33 wind 7.0 14400 < th dose independent rect. 5 10
487 194.37 wind 1.0 43200 < th dose dependent rect. 18 11
492 194.42 wind 3.0 43200 > th dose independent rect. 6 1
494 194.42 radiation 40.0 43200 < th dose dependent rect. 19 11
502 194.46 radiation 40.0 43200 < th dose dependent rect. 21 9
511 194.49 radiation 40.0 43200 < th dose independent rect. 7 4
515 194.49 radiation 40.0 43200 < th dose independent rect. 18 17
520 194.50 radiation 40.0 43200 < th dose independent rect. 1 10
521 194.50 radiation 40.0 43200 < th dose independent rect. 22 13
551 194.59 radiation 40.0 43200 < th dose dependent rect. 3 3
556 194.60 radiation 40.0 43200 < th dose dependent rect. 1 5
559 194.61 wind 7.0 14400 < th dose independent sin 2 NA
564 194.62 wind 7.0 14400 < th dose independent rect. 19 19
590 194.69 wind 7.0 43200 < th dose independent sin 21 NA
609 194.73 radiation 1.0 43200 > th dose dependent rect. 5 1
615 194.76 humidity 60.0 14400 > th dose independent rect. 15 1
634 194.78 wind 7.0 43200 < th dose independent rect. 5 13
649 194.84 wind 7.0 43200 > th dose independent sin 21 NA
654 194.87 wind 7.0 43200 > th dose independent rect. 5 13
666 194.93 wind 7.0 14400 > th dose independent sin 2 NA
700 195.03 wind 3.0 43200 < th dose dependent rect. 1 2
789 195.45 humidity 80.0 43200 < th dose independent rect. 3 1
822 195.54 wind 1.0 43200 > th dose independent rect. 8 3
860 195.71 radiation 20.0 43200 < th dose independent rect. 16 17
867 195.76 wind 5.0 14400 > th dose dependent rect. 5 9
868 195.77 wind 1.0 43200 < th dose independent rect. 8 3
877 195.81 radiation 40.0 43200 < th dose independent rect. 14 16
879 195.82 radiation 40.0 43200 < th dose independent rect. 14 8
886 195.82 radiation 40.0 43200 < th dose independent rect. 14 14
889 195.83 radiation 40.0 43200 < th dose independent rect. 14 3
890 195.83 radiation 40.0 43200 < th dose independent rect. 14 5
904 195.84 wind 1.0 43200 < th dose dependent rect. 7 1
906 195.84 radiation 10.0 43200 > th dose dependent rect. 17 14
913 195.89 wind 3.0 43200 > th dose independent rect. 18 16
931 195.93 radiation 10.0 43200 < th dose independent rect. 17 15
942 195.96 wind 3.0 43200 < th dose independent rect. 18 16
965 196.05 wind 3.0 43200 < th dose independent rect. 6 1
967 196.05 wind 1.0 43200 < th dose dependent rect. 22 6
972 196.08 wind 3.0 43200 < th dose independent rect. 19 12