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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0370600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutathione-S-transferase 19E50.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0207) R2 : 0.0169
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.122 (0.0436) R2dN8 : 0.0219 R2N8 : 0.0169
σ : 0.39
deviance : 69.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.99 0.387 2.97 0.174 0.112 0.109 -0.202 0.309 0.118 3.58 90 273 -- --
68.3 0.385 2.96 0.15 0.106 0.11 -0.395 -- 0.117 3.84 89.92 273 -- --
68.07 0.384 2.97 0.183 0.112 0.108 -- 0.426 0.117 3.48 90.23 257 -- --
68.75 0.386 2.96 0.157 0.112 0.122 -- -- 0.118 3.8 89.95 273 -- --
68.52 0.386 2.97 0.172 -- 0.0469 -- 0.427 0.132 -- 91.27 243 -- --
68.79 0.389 2.96 0.128 0.0345 -- -0.434 -- 0.134 3.44 -- -- -- --
69.35 0.39 2.96 0.136 0.0375 -- -- -- 0.137 1.02 -- -- -- --
68.94 0.387 2.96 0.151 -- 0.0959 -- -- 0.116 -- 92.22 155 -- --
69.39 0.388 2.97 -- 0.103 0.105 -- -- 0.102 3.67 89.63 273 -- --
69.44 0.389 2.96 0.137 -- -- -- -- 0.138 -- -- -- -- --
69.84 0.391 2.96 -- 0.0398 -- -- -- 0.122 1.16 -- -- -- --
69.54 0.388 2.97 -- -- 0.0847 -- -- 0.102 -- 92.53 147 -- --
69.94 0.39 2.96 -- -- -- -- -- 0.122 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.96 precipitation 0.1 30 > th dose independent rect. 7 7
9 59.96 precipitation 0.1 30 > th dose dependent rect. 7 7
17 59.98 humidity 90.0 10 > th dose independent rect. 13 1
25 59.98 humidity 90.0 10 > th dose dependent rect. 13 1
33 59.99 precipitation 0.1 90 > th dose independent rect. 13 1
36 59.99 precipitation 0.1 90 > th dose dependent rect. 13 1
39 60.00 humidity 90.0 90 > th dose dependent rect. 13 1
41 60.01 humidity 90.0 90 > th dose independent rect. 13 1
161 61.67 wind 3.0 30 < th dose dependent rect. 2 1
163 61.69 temperature 25.0 30 < th dose independent rect. 2 1
165 61.70 humidity 80.0 30 > th dose independent rect. 2 1
167 61.70 atmosphere 1005.0 30 > th dose dependent rect. 2 1
168 61.71 wind 3.0 30 < th dose independent rect. 2 1
169 61.72 wind 9.0 30 < th dose independent rect. 2 1
170 61.72 temperature 10.0 30 > th dose independent rect. 2 1
173 61.72 humidity 50.0 30 > th dose independent rect. 2 1
176 61.72 atmosphere 995.0 30 > th dose independent rect. 2 1
177 61.72 atmosphere 1010.0 30 < th dose independent rect. 2 1
179 61.72 radiation 1.0 30 < th dose independent rect. 2 1
184 61.72 precipitation 0.1 30 < th dose independent rect. 2 1
185 61.72 temperature 10.0 30 > th dose independent rect. 3 23
186 61.72 temperature 10.0 30 > th dose dependent rect. 2 1
188 61.72 humidity 50.0 30 > th dose dependent rect. 2 1
190 61.72 atmosphere 995.0 30 > th dose dependent rect. 2 1
192 61.72 radiation 1.0 30 < th dose dependent rect. 2 1
197 61.72 precipitation 0.1 30 < th dose dependent rect. 2 1
202 61.75 atmosphere 1005.0 30 > th dose independent rect. 2 1
208 61.83 atmosphere 1015.0 30 < th dose dependent rect. 2 1
215 61.86 temperature 30.0 30 < th dose dependent rect. 2 1
227 62.30 wind 1.0 30 > th dose independent rect. 2 1
232 62.34 wind 9.0 30 < th dose independent rect. 3 23
301 64.64 radiation 10.0 10 > th dose independent rect. 6 1
327 64.64 radiation 10.0 10 > th dose dependent rect. 6 1
353 64.69 atmosphere 995.0 30 > th dose independent rect. 3 23
360 64.73 atmosphere 1015.0 720 < th dose independent rect. 3 8
361 64.74 wind 9.0 720 < th dose independent rect. 3 8
363 64.80 temperature 15.0 720 > th dose independent rect. 3 8
372 64.83 temperature 15.0 720 > th dose independent rect. 11 16
374 64.84 atmosphere 995.0 720 > th dose independent rect. 3 8
378 64.93 humidity 90.0 10 < th dose independent rect. 22 1
379 64.95 atmosphere 1010.0 30 < th dose dependent rect. 22 1
381 64.99 temperature 10.0 720 > th dose independent rect. 15 8
382 64.99 temperature 10.0 720 > th dose independent rect. 23 16
383 65.02 radiation 40.0 720 < th dose independent rect. 15 8
393 65.15 humidity 90.0 30 < th dose dependent rect. 22 1
395 65.16 wind 3.0 30 < th dose independent rect. 22 1
396 65.16 temperature 20.0 10 > th dose dependent rect. 22 1
397 65.17 temperature 20.0 30 > th dose independent rect. 22 1
398 65.17 wind 5.0 30 < th dose dependent rect. 22 1
403 65.19 wind 1.0 30 > th dose independent rect. 22 1
404 65.19 precipitation 0.1 30 < th dose independent rect. 22 1
409 65.19 precipitation 0.1 30 < th dose dependent rect. 22 1
413 65.20 temperature 10.0 30 > th dose independent rect. 22 1
415 65.20 temperature 30.0 30 < th dose independent rect. 22 1
416 65.20 humidity 50.0 30 > th dose independent rect. 22 1
420 65.20 atmosphere 995.0 30 > th dose independent rect. 22 1
421 65.20 atmosphere 1010.0 30 < th dose independent rect. 22 1
423 65.20 radiation 1.0 30 < th dose independent rect. 22 1
428 65.20 wind 9.0 10 < th dose independent rect. 23 23
429 65.20 temperature 10.0 30 > th dose independent rect. 23 23
431 65.20 radiation 1.0 30 < th dose dependent rect. 22 1
438 65.23 wind 9.0 1440 < th dose independent rect. 23 1
440 65.23 temperature 10.0 1440 > th dose independent rect. 23 1
443 65.23 temperature 30.0 1440 < th dose independent rect. 23 1
447 65.23 humidity 50.0 1440 > th dose independent rect. 23 1
457 65.23 atmosphere 995.0 1440 > th dose independent rect. 23 1
458 65.23 radiation 1.0 1440 < th dose independent rect. 23 1
478 65.23 temperature 10.0 1440 > th dose independent rect. 24 23
482 65.23 humidity 50.0 30 > th dose dependent rect. 22 1
483 65.23 radiation 1.0 1440 < th dose dependent rect. 23 1
493 65.25 humidity 50.0 720 > th dose independent rect. 3 8
504 65.28 atmosphere 995.0 30 > th dose dependent rect. 22 1
505 65.28 atmosphere 1005.0 30 > th dose dependent rect. 22 1
506 65.29 wind 1.0 30 > th dose dependent rect. 22 1
509 65.29 temperature 30.0 30 < th dose dependent rect. 22 1
522 65.31 atmosphere 1005.0 30 > th dose independent rect. 22 1
568 65.50 wind 9.0 720 < th dose independent rect. 15 8
585 65.56 atmosphere 995.0 30 > th dose independent rect. 23 23
593 65.59 precipitation 0.1 30 < th dose independent rect. 3 23
594 65.59 precipitation 0.1 30 < th dose dependent rect. 3 23
596 65.61 atmosphere 995.0 720 > th dose independent rect. 23 16
607 65.65 radiation 20.0 10 < th dose independent rect. 12 3
610 65.65 precipitation 0.1 720 < th dose independent rect. 15 8
613 65.65 precipitation 0.1 720 < th dose dependent rect. 15 8
634 65.71 radiation 20.0 10 < th dose independent rect. 14 1
655 65.80 precipitation 0.1 720 < th dose independent rect. 3 8
657 65.80 precipitation 0.1 720 < th dose dependent rect. 3 8
658 65.81 wind 9.0 720 < th dose independent rect. 23 16
661 65.82 precipitation 0.1 720 < th dose independent rect. 23 16
662 65.82 precipitation 0.1 720 < th dose dependent rect. 23 16
675 65.92 wind 9.0 720 < th dose independent rect. 11 16
676 65.93 wind 1.0 10 > th dose independent rect. 23 23
700 66.01 wind 3.0 30 < th dose dependent rect. 6 1
716 66.07 atmosphere 1005.0 30 > th dose dependent rect. 6 1
736 66.12 precipitation 0.1 720 < th dose independent rect. 11 16
737 66.12 precipitation 0.1 30 < th dose independent rect. 23 23
739 66.12 precipitation 0.1 720 < th dose dependent rect. 11 16
740 66.12 precipitation 0.1 30 < th dose dependent rect. 23 23
743 66.15 atmosphere 1000.0 10 < th dose independent rect. 18 4
747 66.16 atmosphere 1000.0 30 < th dose dependent rect. 18 4
749 66.17 atmosphere 1000.0 90 < th dose independent rect. 18 3
756 66.18 atmosphere 1000.0 90 < th dose independent rect. 20 1
757 66.18 atmosphere 1000.0 10 < th dose independent rect. 21 1
777 66.18 atmosphere 1000.0 90 < th dose dependent rect. 20 1
778 66.18 atmosphere 1000.0 10 < th dose dependent rect. 21 1
814 66.29 atmosphere 995.0 720 > th dose independent rect. 11 16
816 66.31 atmosphere 995.0 720 > th dose independent rect. 15 8
829 66.36 precipitation 0.1 1440 < th dose independent rect. 23 1
831 66.36 humidity 80.0 30 > th dose dependent rect. 6 1
832 66.36 precipitation 0.1 1440 < th dose dependent rect. 23 1
833 66.37 wind 1.0 90 < th dose dependent rect. 17 4
839 66.39 wind 1.0 90 < th dose dependent rect. 20 1
855 66.48 atmosphere 1015.0 30 < th dose independent rect. 3 23
864 66.52 wind 9.0 1440 < th dose independent rect. 3 1
865 66.52 temperature 10.0 1440 > th dose independent rect. 3 1
868 66.52 temperature 30.0 1440 < th dose independent rect. 3 1
872 66.52 humidity 50.0 1440 > th dose independent rect. 3 1
881 66.52 atmosphere 995.0 1440 > th dose independent rect. 3 1
882 66.52 radiation 1.0 1440 < th dose independent rect. 3 1
905 66.52 temperature 10.0 1440 > th dose independent rect. 4 23
908 66.52 radiation 1.0 1440 < th dose dependent rect. 3 1
935 66.56 temperature 30.0 30 < th dose dependent rect. 6 1
943 66.60 atmosphere 1015.0 1440 < th dose independent rect. 3 1
962 66.67 wind 1.0 30 > th dose dependent rect. 2 1
966 66.70 wind 3.0 30 < th dose independent rect. 6 1
976 66.73 temperature 20.0 90 > th dose dependent rect. 21 6
993 66.77 temperature 25.0 720 > th dose dependent rect. 23 10