Os01g0370200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione-S-transferase 19E50.
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Os01g0370200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione-S-transferase 19E50.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.15 | 0.385 | 3.06 | -0.456 | 0.184 | -0.22 | -0.177 | 0.881 | -0.115 | 3.49 | 24.8 | 418 | -- | -- |
| 68.76 | 0.386 | 3.03 | -0.198 | 0.146 | -0.173 | 0.0169 | -- | -0.0171 | 3.5 | 24.2 | 383 | -- | -- |
| 67.22 | 0.382 | 3.05 | -0.437 | 0.188 | -0.222 | -- | 0.836 | -0.108 | 3.73 | 24.9 | 417 | -- | -- |
| 68.62 | 0.386 | 3.03 | -0.191 | 0.144 | -0.16 | -- | -- | -0.0126 | 2.17 | 24.08 | 355 | -- | -- |
| 67.96 | 0.384 | 3.06 | -0.479 | -- | -0.298 | -- | 1.01 | -0.121 | -- | 25.44 | 980 | -- | -- |
| 70.15 | 0.393 | 3.01 | -0.134 | 0.123 | -- | -0.172 | -- | 0.0556 | 0.346 | -- | -- | -- | -- |
| 70.25 | 0.392 | 3.01 | -0.128 | 0.126 | -- | -- | -- | 0.056 | 1.05 | -- | -- | -- | -- |
| 69.15 | 0.387 | 3.03 | -0.203 | -- | -0.259 | -- | -- | -0.0336 | -- | 25.5 | 1032 | -- | -- |
| 69.54 | 0.388 | 3.02 | -- | 0.137 | -0.128 | -- | -- | 0.0221 | 1.97 | 24.1 | 345 | -- | -- |
| 71.24 | 0.394 | 3.01 | -0.123 | -- | -- | -- | -- | 0.0584 | -- | -- | -- | -- | -- |
| 70.68 | 0.393 | 3.01 | -- | 0.124 | -- | -- | -- | 0.0702 | 1.01 | -- | -- | -- | -- |
| 70.09 | 0.39 | 3.02 | -- | -- | -0.205 | -- | -- | 0.00714 | -- | 25.51 | 1024 | -- | -- |
| 71.63 | 0.395 | 3.01 | -- | -- | -- | -- | -- | 0.0721 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.22 | wind | 9 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 58.22 | wind | 9 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 9 | 58.95 | wind | 9 | 90 | > th | dose dependent | sin | 13 | NA |
| 10 | 59.00 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 4 |
| 11 | 59.01 | wind | 9 | 90 | > th | dose independent | sin | 13 | NA |
| 19 | 59.09 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 4 |
| 33 | 59.10 | wind | 9 | 90 | > th | dose dependent | rect. | 16 | 10 |
| 44 | 59.11 | wind | 9 | 90 | > th | dose dependent | rect. | 16 | 6 |
| 101 | 59.23 | wind | 9 | 90 | < th | dose independent | sin | 12 | NA |
| 109 | 59.33 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 20 |
| 278 | 64.62 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 1 |
| 289 | 64.94 | wind | 9 | 10 | > th | dose independent | sin | 13 | NA |
| 291 | 64.99 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 4 |
| 303 | 65.14 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 446 | 65.45 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 13 |
| 488 | 65.50 | temperature | 25 | 270 | < th | dose independent | rect. | 18 | 10 |
| 507 | 65.60 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 7 |
| 572 | 65.70 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 10 |
| 614 | 65.84 | temperature | 25 | 270 | > th | dose independent | sin | 13 | NA |
| 650 | 66.09 | temperature | 25 | 270 | < th | dose independent | sin | 12 | NA |
| 654 | 66.11 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 737 | 66.42 | temperature | 25 | 720 | > th | dose independent | rect. | 19 | 1 |
| 743 | 66.44 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 1 |
| 765 | 66.53 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 14 |
| 772 | 66.56 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 776 | 66.59 | wind | 3 | 10 | < th | dose independent | rect. | 20 | 3 |
| 834 | 66.67 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 10 |
| 844 | 66.68 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 17 |
| 870 | 66.71 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 911 | 66.79 | temperature | 25 | 270 | < th | dose independent | rect. | 18 | 21 |
| 918 | 66.81 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 12 |
| 928 | 66.83 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 14 |
| 939 | 66.86 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 15 |
| 954 | 66.92 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 15 |
| 956 | 66.92 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 979 | 66.95 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 17 | 1 |
| 990 | 66.96 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 17 |
| 992 | 66.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 1 |