Os01g0369700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase GST 8 (EC 2.5.1.18).
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Os01g0369700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase GST 8 (EC 2.5.1.18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.97 | 0.517 | 11.7 | 0.0141 | 1.15 | -0.88 | -0.732 | 0.617 | 0.293 | 11 | 21.1 | 4095 | -- | -- |
| 121.64 | 0.514 | 11.7 | -0.0757 | 1.16 | -1 | -0.796 | -- | 0.3 | 10.9 | 21.1 | 4213 | -- | -- |
| 123.2 | 0.517 | 11.7 | -0.000378 | 1.15 | -0.859 | -- | 0.71 | 0.289 | 11.1 | 21.1 | 4037 | -- | -- |
| 123.91 | 0.518 | 11.7 | -0.139 | 1.15 | -0.954 | -- | -- | 0.277 | 11.1 | 21.1 | 4176 | -- | -- |
| 203.72 | 0.665 | 11.7 | 0.0741 | -- | -0.914 | -- | 0.911 | 0.36 | -- | 21.73 | 3757 | -- | -- |
| 141.75 | 0.558 | 11.8 | -0.704 | 1.18 | -- | -0.726 | -- | -0.0399 | 11.1 | -- | -- | -- | -- |
| 144 | 0.562 | 11.8 | -0.733 | 1.18 | -- | -- | -- | -0.0422 | 11.2 | -- | -- | -- | -- |
| 204.64 | 0.666 | 11.7 | -0.0602 | -- | -1.15 | -- | -- | 0.298 | -- | 20.8 | 3755 | -- | -- |
| 124.28 | 0.519 | 11.7 | -- | 1.17 | -1.02 | -- | -- | 0.294 | 11.1 | 21 | 4176 | -- | -- |
| 231.39 | 0.711 | 11.8 | -0.762 | -- | -- | -- | -- | -0.0524 | -- | -- | -- | -- | -- |
| 158.17 | 0.588 | 11.8 | -- | 1.19 | -- | -- | -- | 0.0395 | 11.2 | -- | -- | -- | -- |
| 203.44 | 0.664 | 11.7 | -- | -- | -1.19 | -- | -- | 0.271 | -- | 20.8 | 2385 | -- | -- |
| 246.69 | 0.733 | 11.8 | -- | -- | -- | -- | -- | 0.0321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.79 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 3 | 118.83 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 5 |
| 4 | 118.83 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 7 |
| 9 | 118.85 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 14 | 119.02 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 15 | 119.06 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 7 |
| 45 | 119.48 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 3 |
| 47 | 119.50 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 49 | 119.51 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 50 | 119.51 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 1 | 3 |
| 93 | 119.82 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 95 | 119.82 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 147 | 120.23 | temperature | 20.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 153 | 120.27 | temperature | 20.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 161 | 120.29 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 169 | 120.35 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 190 | 120.47 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 213 | 120.53 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 1 |
| 214 | 120.53 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 0 | NA |
| 224 | 120.58 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 241 | 120.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 243 | 120.64 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 256 | 120.65 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 268 | 120.68 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 282 | 120.74 | temperature | 15.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 288 | 120.75 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 11 |
| 293 | 120.76 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 295 | 120.77 | humidity | 90.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 302 | 120.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 305 | 120.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 324 | 120.82 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 329 | 120.83 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 334 | 120.84 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 338 | 120.85 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 344 | 120.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 345 | 120.86 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 347 | 120.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 351 | 120.87 | temperature | 15.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 354 | 120.87 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 356 | 120.88 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 358 | 120.88 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 367 | 120.90 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 375 | 120.92 | temperature | 15.0 | 43200 | > th | dose independent | rect. | 24 | 5 |
| 377 | 120.92 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 392 | 120.94 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 393 | 120.94 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 405 | 120.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 408 | 120.96 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 412 | 120.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 416 | 120.97 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 454 | 121.02 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 470 | 121.03 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 476 | 121.04 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 492 | 121.07 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 514 | 121.09 | humidity | 90.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 529 | 121.10 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 547 | 121.12 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 567 | 121.14 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 570 | 121.15 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 573 | 121.15 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 15 |
| 625 | 121.20 | temperature | 15.0 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 633 | 121.21 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 661 | 121.23 | temperature | 15.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 699 | 121.26 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 715 | 121.27 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 735 | 121.28 | temperature | 15.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 741 | 121.28 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 751 | 121.29 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 754 | 121.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 758 | 121.30 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 778 | 121.31 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 827 | 121.33 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 869 | 121.35 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 886 | 121.36 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 919 | 121.38 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 920 | 121.38 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 939 | 121.38 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 946 | 121.39 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 973 | 121.40 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 988 | 121.40 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |