Os01g0369600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0369600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.4 | 0.343 | 9.86 | -0.973 | 0.833 | -0.696 | 0.911 | -1.88 | 0.418 | 3.22 | 68.6 | 7468 | -- | -- |
| 58.6 | 0.357 | 9.87 | -0.877 | 0.829 | -0.763 | 0.91 | -- | 0.432 | 3.26 | 68 | 7395 | -- | -- |
| 56.08 | 0.349 | 9.86 | -0.975 | 0.833 | -0.674 | -- | -1.9 | 0.41 | 3.24 | 68.95 | 7473 | -- | -- |
| 61.32 | 0.365 | 9.88 | -0.891 | 0.829 | -0.732 | -- | -- | 0.425 | 3.34 | 68.27 | 7395 | -- | -- |
| 87.39 | 0.438 | 9.9 | -0.803 | -- | -0.479 | -- | -0.931 | 0.349 | -- | 68.95 | 7473 | -- | -- |
| 67.84 | 0.386 | 9.89 | -0.786 | 0.843 | -- | 0.822 | -- | 0.342 | 3.31 | -- | -- | -- | -- |
| 69.99 | 0.392 | 9.9 | -0.802 | 0.848 | -- | -- | -- | 0.338 | 3.37 | -- | -- | -- | -- |
| 80.25 | 0.419 | 9.9 | -0.72 | -- | -0.551 | -- | -- | 0.354 | -- | 73 | 4713 | -- | -- |
| 79.49 | 0.415 | 9.85 | -- | 0.826 | -0.681 | -- | -- | 0.51 | 3.27 | 70 | 5948 | -- | -- |
| 110.45 | 0.491 | 9.9 | -0.766 | -- | -- | -- | -- | 0.36 | -- | -- | -- | -- | -- |
| 86.94 | 0.436 | 9.88 | -- | 0.832 | -- | -- | -- | 0.427 | 3.37 | -- | -- | -- | -- |
| 93.91 | 0.453 | 9.88 | -- | -- | -0.567 | -- | -- | 0.433 | -- | 73 | 4713 | -- | -- |
| 125.93 | 0.524 | 9.88 | -- | -- | -- | -- | -- | 0.445 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 2 | 52.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 3 | 52.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 9 | 52.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 13 | 52.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 14 | 52.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 15 | 52.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 23 | 52.69 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 39 | 53.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 42 | 53.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 43 | 53.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 44 | 53.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 45 | 53.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 46 | 53.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 47 | 53.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 48 | 53.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 50 | 53.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 52 | 53.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 5 |
| 70 | 53.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 74 | 53.26 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 75 | 53.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 77 | 53.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 107 | 53.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 121 | 53.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 122 | 53.45 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 123 | 53.45 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 128 | 53.47 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 130 | 53.50 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 135 | 53.52 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 146 | 53.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 149 | 53.54 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 155 | 53.54 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 162 | 53.56 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 170 | 53.58 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 195 | 53.68 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 196 | 53.68 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 197 | 53.68 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 272 | 53.94 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 305 | 54.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 326 | 54.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 332 | 54.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 336 | 54.11 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 339 | 54.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 342 | 54.13 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 343 | 54.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 378 | 54.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 423 | 54.35 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 437 | 54.39 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 448 | 54.41 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 489 | 54.52 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 512 | 54.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 528 | 54.60 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 530 | 54.61 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 540 | 54.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 545 | 54.64 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 571 | 54.69 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 578 | 54.71 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 594 | 54.74 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 595 | 54.74 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 611 | 54.80 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 614 | 54.81 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 629 | 54.86 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 635 | 54.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 638 | 54.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 662 | 54.91 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 665 | 54.92 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 699 | 54.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 711 | 55.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 729 | 55.06 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 744 | 55.10 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 22 |
| 749 | 55.11 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 775 | 55.12 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 780 | 55.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 784 | 55.13 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 800 | 55.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 810 | 55.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 811 | 55.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 829 | 55.15 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 831 | 55.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 21 |
| 843 | 55.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 854 | 55.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 865 | 55.19 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 891 | 55.24 | humidity | 60.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 893 | 55.24 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 995 | 55.25 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 2 |