Os01g0369300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : K+ potassium transporter family protein.
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Os01g0369300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : K+ potassium transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.58 | 0.492 | 5.44 | 1.92 | 0.679 | 7.17 | 0.25 | -17.1 | -0.351 | 4.63 | 49.94 | 303 | -- | -- |
| 120.78 | 0.512 | 5.36 | 1.99 | 0.643 | 1.6 | 0.641 | -- | -0.368 | 4.2 | 50.36 | 272 | -- | -- |
| 109.72 | 0.488 | 5.44 | 1.92 | 0.676 | 7.22 | -- | -17.4 | -0.353 | 4.56 | 49.87 | 308 | -- | -- |
| 112.57 | 0.494 | 5.37 | 2.14 | 0.7 | 0.815 | -- | -- | -0.347 | 4.51 | 60.26 | 443 | -- | -- |
| 131.54 | 0.534 | 5.44 | 2.02 | -- | 6.77 | -- | -17.5 | -0.356 | -- | 49.23 | 323 | -- | -- |
| 121.67 | 0.517 | 5.39 | 2.23 | 0.53 | -- | -0.16 | -- | -0.396 | 3.9 | -- | -- | -- | -- |
| 121.74 | 0.517 | 5.39 | 2.23 | 0.53 | -- | -- | -- | -0.395 | 3.94 | -- | -- | -- | -- |
| 125.74 | 0.522 | 5.39 | 2.17 | -- | 0.704 | -- | -- | -0.376 | -- | 86.4 | 1191 | -- | -- |
| 229.69 | 0.706 | 5.41 | -- | 0.843 | 1.47 | -- | -- | -0.538 | 4.65 | 57 | 463 | -- | -- |
| 137.11 | 0.547 | 5.39 | 2.26 | -- | -- | -- | -- | -0.381 | -- | -- | -- | -- | -- |
| 253.24 | 0.744 | 5.44 | -- | 0.573 | -- | -- | -- | -0.644 | 3.89 | -- | -- | -- | -- |
| 242.62 | 0.725 | 5.4 | -- | -- | 1.41 | -- | -- | -0.453 | -- | 58.91 | 1198 | -- | -- |
| 271.29 | 0.769 | 5.44 | -- | -- | -- | -- | -- | -0.631 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.71 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 15 | 13 |
| 2 | 102.71 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 5 | 102.74 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 9 | 103.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 13 | 103.22 | humidity | 70.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 16 | 103.32 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 13 |
| 40 | 103.77 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 43 | 103.82 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 16 | 7 |
| 49 | 103.93 | humidity | 70.0 | 270 | > th | dose independent | sin | 13 | NA |
| 50 | 103.93 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 86 | 104.21 | humidity | 70.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 97 | 104.34 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 16 | 9 |
| 107 | 104.45 | radiation | 1.0 | 270 | < th | dose independent | sin | 14 | NA |
| 112 | 104.49 | temperature | 25.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 126 | 104.64 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 13 |
| 133 | 104.68 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 135 | 104.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 136 | 104.72 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 154 | 104.79 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 14 |
| 177 | 104.92 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 19 | 6 |
| 180 | 104.96 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 206 | 105.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 228 | 105.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 231 | 105.35 | radiation | 1.0 | 270 | > th | dose independent | sin | 14 | NA |
| 299 | 105.76 | humidity | 70.0 | 270 | < th | dose independent | sin | 13 | NA |
| 310 | 105.81 | humidity | 80.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 343 | 105.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 4 |
| 397 | 106.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 406 | 106.18 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 19 | 7 |
| 447 | 106.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 454 | 106.43 | temperature | 10.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 477 | 106.54 | radiation | 20.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 515 | 106.56 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 6 |
| 568 | 106.80 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 589 | 106.84 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 595 | 106.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 604 | 106.88 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 659 | 107.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 678 | 107.11 | temperature | 30.0 | 270 | < th | dose independent | sin | 12 | NA |
| 690 | 107.16 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 700 | 107.19 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 705 | 107.20 | radiation | 20.0 | 90 | < th | dose independent | rect. | 1 | 19 |
| 710 | 107.21 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 711 | 107.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 23 |
| 712 | 107.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 725 | 107.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 5 |
| 728 | 107.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 729 | 107.25 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 731 | 107.26 | humidity | 70.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 734 | 107.26 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 12 |
| 742 | 107.26 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 746 | 107.27 | humidity | 70.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 755 | 107.27 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 756 | 107.27 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 758 | 107.27 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 771 | 107.28 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 774 | 107.29 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 775 | 107.29 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 784 | 107.29 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 9 | 13 |
| 785 | 107.29 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 9 | 14 |
| 789 | 107.30 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 800 | 107.31 | humidity | 50.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 835 | 107.35 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 844 | 107.35 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 845 | 107.35 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 855 | 107.36 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 870 | 107.37 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 882 | 107.37 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 21 |
| 885 | 107.37 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 887 | 107.37 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 914 | 107.39 | humidity | 70.0 | 14400 | > th | dose independent | no | NA | NA |
| 919 | 107.39 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 5 | 18 |
| 935 | 107.39 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 948 | 107.39 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 976 | 107.40 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 23 |