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Os01g0368900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GLUTAREDOXIN.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.8 (0.0937) R2 : 0.691
β1 : -11.9 (0.372) R2dD : 1.05 R2D : 0.363
β2 : 2.47 (0.227) R2dC : 0.14 R2C : 0.0166
β3 : 10.6 (0.737) R2dE : 0.301 R2E : -0.541
β4 : 7.48 (0.945) R2dD*C : 0.0961 R2D*C : -0.0733
β5 : 45.9 (3.37) R2dD*E : 0.28 R2D*E : -0.279
γ1 : -1.52 (0.187) R2dN8 : 0.0663 R2N8 : -0.0722
σ : 1.52
deviance : 1042.13
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C
peak time of C : 10.4
E
wheather : radiation
threshold : 0.9873
memory length : 1442
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20
open length of G : 9.05

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
1042.13 1.52 8.8 -11.9 2.47 10.6 7.48 45.9 -1.52 10.4 0.9873 1442 20 9.05
1373.51 1.74 9.25 -8.43 3.79 2.31 2.14 -- -1.24 10.8 1.123 1445 19.9 9.29
1141.62 1.57 8.79 -11.9 1.84 10.9 -- 46 -1.42 9.87 0.9279 1440 20 9.05
1248.34 1.65 9.25 -8.29 3.63 4.12 -- -- -1.29 10.5 1.886 1450 19.9 9.41
1360.3 1.72 8.86 -11.9 -- 10.9 -- 46 -1.42 -- 0.9279 1440 20 9.05
1519.18 1.83 9.3 -8.48 1.73 -- 2.1 -- -1.31 8.53 -- -- -- --
1532.73 1.83 9.3 -8.42 1.74 -- -- -- -1.32 8.29 -- -- -- --
1523.15 1.82 9.26 -7.75 -- 3.26 -- -- -0.936 -- 1.704 1431 20.9 9.38
2629.67 2.39 9.01 -- 2.95 7.48 -- -- 0.135 10.1 0.8626 1465 19.5 11.4
1700.27 1.93 9.35 -8.41 -- -- -- -- -1.3 -- -- -- -- --
3401.2 2.73 9.09 -- 1.71 -- -- -- -0.379 8.65 -- -- -- --
1774.25 1.96 8.75 -- -- 6.42 -- -- 1.2 -- 0.009983 47520 21.6 11.1
3565.17 2.79 9.14 -- -- -- -- -- -0.365 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1021.84 wind 9 43200 > th dose dependent rect. 13 1
2 1028.50 wind 9 43200 < th dose independent rect. 13 1
3 1037.55 radiation 40 43200 < th dose independent rect. 10 1
5 1043.35 wind 9 43200 > th dose independent rect. 13 1
7 1048.72 radiation 40 43200 > th dose dependent rect. 10 1
8 1049.87 humidity 80 43200 < th dose dependent rect. 22 1
9 1050.31 wind 3 43200 < th dose dependent rect. 9 1
10 1050.84 wind 1 43200 < th dose dependent rect. 1 1
11 1053.53 radiation 40 43200 > th dose independent rect. 10 1
12 1056.04 humidity 80 43200 < th dose dependent rect. 21 9
35 1064.24 humidity 80 43200 < th dose dependent rect. 3 3
58 1068.38 wind 5 14400 > th dose dependent rect. 4 10
68 1071.96 humidity 80 43200 > th dose independent rect. 1 4
69 1071.99 humidity 80 43200 > th dose independent rect. 3 1
82 1074.34 humidity 80 43200 < th dose independent rect. 24 4
84 1074.49 wind 3 43200 < th dose dependent rect. 8 3
89 1074.90 humidity 80 43200 < th dose independent rect. 3 1
92 1075.30 humidity 80 43200 < th dose independent rect. 24 1
103 1076.32 wind 7 43200 > th dose dependent rect. 10 5
123 1079.73 humidity 80 43200 < th dose independent rect. 5 1
125 1079.90 wind 5 14400 < th dose independent rect. 3 10
136 1081.38 radiation 40 43200 < th dose independent rect. 15 21
140 1082.11 wind 5 14400 > th dose independent rect. 4 9
149 1083.27 radiation 40 43200 < th dose independent rect. 1 10
152 1083.32 radiation 40 43200 < th dose independent rect. 5 6
159 1083.51 radiation 40 43200 < th dose independent rect. 21 14
165 1083.75 wind 9 43200 > th dose independent rect. 10 5
168 1084.77 wind 9 43200 < th dose independent rect. 10 5
181 1086.83 wind 5 14400 > th dose dependent sin 5 NA
227 1090.99 radiation 40 43200 > th dose dependent rect. 15 21
228 1091.18 radiation 40 43200 > th dose dependent rect. 7 5
257 1092.32 wind 3 43200 > th dose independent rect. 9 1
282 1093.72 wind 3 43200 < th dose independent rect. 9 1
286 1094.03 wind 7 14400 > th dose independent rect. 20 18
287 1094.06 wind 5 14400 > th dose dependent rect. 20 18
303 1096.09 radiation 20 43200 < th dose independent rect. 8 1
318 1097.69 radiation 20 43200 < th dose independent rect. 17 16
323 1098.19 wind 7 14400 < th dose independent rect. 20 18
324 1098.27 radiation 40 43200 < th dose independent sin 10 NA
340 1100.27 radiation 20 43200 < th dose independent rect. 1 8
343 1100.32 radiation 20 43200 < th dose independent rect. 5 4
350 1100.50 radiation 20 43200 < th dose independent rect. 21 12
373 1102.80 wind 7 43200 > th dose independent rect. 4 13
375 1102.91 wind 7 43200 < th dose independent rect. 5 12
405 1103.94 wind 9 43200 < th dose independent rect. 2 13
428 1105.08 wind 9 43200 < th dose independent rect. 24 15
452 1106.88 radiation 1 1440 < th dose dependent rect. 20 9
462 1107.57 wind 3 43200 > th dose independent rect. 20 14
509 1109.99 wind 3 43200 > th dose independent rect. 20 11
510 1110.16 wind 5 14400 < th dose independent sin 5 NA
513 1110.43 radiation 40 43200 > th dose dependent sin 10 NA
524 1111.11 wind 5 14400 > th dose independent sin 5 NA
564 1113.07 wind 3 43200 < th dose independent rect. 20 14
595 1114.27 wind 3 43200 > th dose independent rect. 20 9
626 1116.23 wind 3 43200 > th dose independent rect. 20 18
629 1116.37 wind 7 43200 < th dose independent sin 1 NA
632 1116.50 wind 3 43200 > th dose dependent rect. 6 1
633 1116.53 wind 7 43200 > th dose independent sin 1 NA
636 1116.62 wind 3 43200 < th dose independent rect. 2 2
638 1116.71 wind 7 43200 > th dose dependent rect. 10 11
650 1117.30 radiation 20 43200 < th dose independent sin 11 NA
663 1117.71 temperature 30 1440 < th dose independent rect. 9 3
702 1118.85 wind 9 43200 < th dose independent rect. 18 21
710 1119.20 radiation 30 14400 > th dose independent rect. 16 1
725 1119.21 wind 3 43200 > th dose independent rect. 2 2
746 1120.03 wind 1 43200 > th dose independent rect. 8 3
749 1120.16 wind 9 43200 > th dose dependent rect. 13 8
751 1120.22 temperature 30 1440 > th dose independent rect. 9 3
760 1120.36 wind 3 43200 < th dose independent rect. 20 11
800 1121.51 temperature 30 1440 < th dose independent rect. 19 17
804 1121.71 wind 1 43200 < th dose dependent rect. 23 5
806 1121.77 wind 3 43200 < th dose independent rect. 20 9
852 1122.85 wind 9 43200 > th dose dependent rect. 13 17
877 1123.25 temperature 30 1440 < th dose independent rect. 23 13
882 1123.39 temperature 30 1440 < th dose independent rect. 2 10
888 1123.64 temperature 30 1440 < th dose independent rect. 4 8
930 1124.68 temperature 30 1440 < th dose independent rect. 7 5
953 1125.14 temperature 30 1440 < th dose independent rect. 10 1
955 1125.17 wind 9 43200 > th dose dependent rect. 13 12
957 1125.21 temperature 25 1440 > th dose dependent rect. 6 2
998 1126.14 wind 9 43200 > th dose dependent rect. 13 10