FiT-DB / Search/ Help/ Sample detail

Os01g0368100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.77 (0.0305) R2 : 0.766
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.93 (0.077) R2dC : 0.741 R2C : 0.742
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.391 (0.0643) R2dN8 : 0.0245 R2N8 : 0.0249
σ : 0.576
deviance : 151.77
__
_____
C
peak time of C : 15.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.35 0.511 6.72 -0.502 2.94 0.468 -1.96 2.1 -0.362 15.4 49.08 5323 -- --
119.75 0.51 6.75 -0.601 2.93 1.24 -2.07 -- -0.352 15.4 49 5370 -- --
130.21 0.531 6.72 -0.55 2.94 0.483 -- 2.13 -0.372 15.4 49.18 5415 -- --
131.77 0.535 6.76 -0.65 2.96 1.23 -- -- -0.343 15.4 49.13 5428 -- --
600.4 1.15 6.76 -0.414 -- 1.2 -- 0.126 -0.431 -- 53.99 7562 -- --
135.94 0.547 6.76 -0.262 2.93 -- -2.08 -- -0.413 15.4 -- -- -- --
149.39 0.572 6.77 -0.301 2.92 -- -- -- -0.425 15.5 -- -- -- --
600.43 1.15 6.76 -0.41 -- 1.2 -- -- -0.43 -- 53.99 7562 -- --
141.21 0.553 6.74 -- 2.94 0.932 -- -- -0.323 15.4 49 5453 -- --
627.81 1.17 6.77 -0.424 -- -- -- -- -0.502 -- -- -- -- --
151.77 0.576 6.77 -- 2.93 -- -- -- -0.391 15.5 -- -- -- --
604.85 1.15 6.75 -- -- 1.21 -- -- -0.384 -- 53.99 7562 -- --
632.55 1.17 6.76 -- -- -- -- -- -0.455 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 105.31 temperature 10.0 270 > th dose dependent rect. 19 14
6 107.56 temperature 20.0 270 > th dose independent rect. 18 17
10 108.37 temperature 30.0 270 < th dose dependent rect. 22 8
16 108.92 temperature 20.0 270 > th dose independent rect. 3 9
25 109.76 temperature 20.0 10 > th dose independent rect. 20 16
26 109.76 temperature 15.0 10 > th dose dependent rect. 20 16
27 109.80 temperature 10.0 90 > th dose dependent sin 8 NA
90 112.55 temperature 15.0 1440 > th dose independent rect. 7 7
99 112.75 wind 1.0 270 > th dose independent rect. 12 16
107 113.04 temperature 15.0 1440 > th dose independent rect. 13 7
122 113.29 wind 7.0 270 < th dose independent rect. 12 16
143 113.68 radiation 40.0 270 < th dose independent rect. 18 17
150 113.93 wind 7.0 270 < th dose independent rect. 11 7
158 114.17 temperature 10.0 270 > th dose dependent rect. 11 6
172 114.49 precipitation 0.1 270 < th dose independent rect. 11 7
174 114.49 precipitation 0.1 270 < th dose dependent rect. 11 7
188 114.63 precipitation 0.1 270 < th dose independent rect. 12 16
190 114.63 precipitation 0.1 270 < th dose dependent rect. 12 16
193 114.67 atmosphere 1010.0 270 < th dose independent rect. 11 7
206 114.84 wind 1.0 270 > th dose independent rect. 11 7
217 114.97 temperature 20.0 270 > th dose independent rect. 11 7
224 115.04 temperature 20.0 30 > th dose independent rect. 23 13
237 115.10 atmosphere 995.0 270 > th dose independent rect. 4 8
238 115.10 atmosphere 1015.0 270 < th dose independent rect. 4 8
239 115.10 temperature 10.0 270 > th dose independent rect. 12 16
246 115.15 temperature 10.0 270 > th dose independent rect. 11 7
255 115.22 wind 9.0 270 < th dose independent rect. 4 8
259 115.24 precipitation 0.1 270 < th dose independent rect. 4 8
260 115.24 precipitation 0.1 270 < th dose dependent rect. 4 8
269 115.33 temperature 20.0 270 > th dose independent rect. 12 5
270 115.33 wind 9.0 270 < th dose independent rect. 18 17
275 115.38 atmosphere 995.0 270 > th dose independent rect. 18 17
289 115.46 temperature 30.0 10 < th dose dependent rect. 24 10
297 115.55 radiation 1.0 270 > th dose independent rect. 11 7
304 115.59 radiation 40.0 270 < th dose independent rect. 5 7
308 115.62 humidity 50.0 270 > th dose independent rect. 17 18
310 115.65 radiation 1.0 270 > th dose independent rect. 12 5
312 115.66 atmosphere 995.0 270 > th dose independent rect. 11 7
314 115.67 atmosphere 995.0 270 > th dose independent rect. 12 16
318 115.68 temperature 20.0 10 > th dose independent sin 5 NA
319 115.68 atmosphere 995.0 270 > th dose independent rect. 12 5
323 115.73 radiation 1.0 270 > th dose independent rect. 11 18
375 116.06 temperature 15.0 10 > th dose independent rect. 14 16
378 116.09 precipitation 0.1 270 < th dose independent rect. 18 17
380 116.09 precipitation 0.1 270 < th dose dependent rect. 18 17
393 116.14 temperature 15.0 270 > th dose independent rect. 11 19
443 116.36 temperature 15.0 10 > th dose dependent rect. 23 13
444 116.37 temperature 30.0 90 < th dose dependent sin 8 NA
500 116.61 temperature 10.0 10 > th dose dependent rect. 12 8
521 116.68 wind 9.0 270 < th dose dependent rect. 12 5
569 116.86 atmosphere 1015.0 4320 < th dose independent rect. 12 1
573 116.87 wind 1.0 10 > th dose independent rect. 12 8
584 116.92 radiation 40.0 4320 < th dose independent rect. 16 15
607 117.02 humidity 50.0 270 > th dose independent rect. 4 8
618 117.05 humidity 90.0 270 < th dose independent rect. 12 5
626 117.08 temperature 20.0 270 > th dose independent sin 8 NA
629 117.09 atmosphere 1015.0 4320 > th dose dependent rect. 13 1
638 117.11 wind 7.0 10 < th dose independent rect. 14 16
656 117.17 atmosphere 1015.0 4320 > th dose independent rect. 13 1
687 117.23 atmosphere 1010.0 10 < th dose independent rect. 12 8
688 117.23 temperature 30.0 270 < th dose independent rect. 18 17
717 117.30 temperature 10.0 270 > th dose dependent rect. 4 7
728 117.33 temperature 10.0 10 > th dose independent rect. 6 8
730 117.33 atmosphere 995.0 10 > th dose independent rect. 6 8
731 117.33 atmosphere 1015.0 10 < th dose independent rect. 6 8
732 117.33 precipitation 0.1 10 < th dose independent rect. 6 8
739 117.33 precipitation 0.1 10 < th dose dependent rect. 6 8
749 117.37 temperature 15.0 270 > th dose independent rect. 9 22
764 117.41 humidity 50.0 4320 < th dose independent rect. 15 1
792 117.50 wind 9.0 10 < th dose independent rect. 12 8
800 117.51 radiation 1.0 270 > th dose independent rect. 5 7
801 117.51 temperature 15.0 270 > th dose independent rect. 16 8
831 117.55 humidity 90.0 270 < th dose independent rect. 11 7
848 117.58 temperature 10.0 10 > th dose independent rect. 12 8
853 117.58 atmosphere 995.0 10 > th dose independent rect. 20 16
857 117.59 atmosphere 1015.0 270 < th dose independent rect. 12 16
882 117.64 radiation 40.0 10 < th dose independent rect. 14 16
883 117.64 radiation 40.0 90 < th dose independent rect. 13 17
910 117.70 wind 9.0 10 < th dose independent rect. 6 8
921 117.74 humidity 50.0 4320 < th dose independent rect. 14 3
980 117.86 radiation 1.0 10 > th dose independent rect. 6 8
981 117.86 atmosphere 995.0 10 > th dose independent rect. 14 16
999 117.88 temperature 25.0 10 < th dose dependent rect. 24 6