Os01g0366300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase.
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Os01g0366300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 304.11 | 0.819 | 4.84 | 3.2 | 0.84 | 1.35 | 0.144 | -0.496 | 0.912 | 2.63 | 51 | 1617 | -- | -- |
| 304.49 | 0.813 | 4.84 | 3.16 | 0.854 | 1.29 | 0.11 | -- | 0.902 | 2.65 | 51.23 | 1608 | -- | -- |
| 304.18 | 0.812 | 4.84 | 3.2 | 0.841 | 1.35 | -- | -0.449 | 0.911 | 2.65 | 51 | 1616 | -- | -- |
| 304.5 | 0.813 | 4.84 | 3.15 | 0.858 | 1.3 | -- | -- | 0.902 | 2.68 | 51.13 | 1608 | -- | -- |
| 333.78 | 0.856 | 4.84 | 3.1 | -- | 1.14 | -- | 0.246 | 0.91 | -- | 61.27 | 1737 | -- | -- |
| 345.34 | 0.871 | 4.85 | 3.1 | 0.989 | -- | -0.135 | -- | 0.843 | 2.86 | -- | -- | -- | -- |
| 345.4 | 0.87 | 4.85 | 3.1 | 0.988 | -- | -- | -- | 0.844 | 2.84 | -- | -- | -- | -- |
| 333.68 | 0.854 | 4.84 | 3.1 | -- | 1.14 | -- | -- | 0.915 | -- | 62 | 1734 | -- | -- |
| 536.54 | 1.08 | 4.88 | -- | 0.804 | 2.11 | -- | -- | 0.807 | 1.6 | 81.74 | 1862 | -- | -- |
| 401.88 | 0.937 | 4.85 | 3.14 | -- | -- | -- | -- | 0.869 | -- | -- | -- | -- | -- |
| 598.97 | 1.14 | 4.93 | -- | 1.05 | -- | -- | -- | 0.498 | 2.87 | -- | -- | -- | -- |
| 572.99 | 1.11 | 4.85 | -- | -- | 2.47 | -- | -- | 0.887 | -- | 81 | 1745 | -- | -- |
| 662.61 | 1.2 | 4.93 | -- | -- | -- | -- | -- | 0.52 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 302.15 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 3 | 302.22 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 27 | 302.57 | humidity | 70 | 1440 | < th | dose independent | sin | 17 | NA |
| 29 | 302.61 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 30 | 302.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 32 | 302.73 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 43 | 302.80 | wind | 1 | 43200 | > th | dose dependent | rect. | 21 | 9 |
| 52 | 303.34 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 62 | 303.46 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 70 | 303.50 | humidity | 50 | 1440 | > th | dose dependent | rect. | 22 | 20 |
| 85 | 303.58 | humidity | 50 | 1440 | > th | dose dependent | rect. | 24 | 18 |
| 103 | 303.72 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 119 | 303.80 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 14 |
| 131 | 303.97 | humidity | 70 | 1440 | > th | dose independent | sin | 18 | NA |
| 133 | 303.98 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 140 | 304.13 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 148 | 304.21 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 214 | 304.70 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 21 |
| 228 | 304.77 | humidity | 60 | 1440 | > th | dose dependent | sin | 0 | NA |
| 229 | 304.77 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 15 |
| 271 | 304.97 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 272 | 304.97 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 334 | 304.99 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 346 | 305.00 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 377 | 305.09 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 453 | 305.16 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 459 | 305.16 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 534 | 305.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 538 | 305.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 8 |
| 541 | 305.36 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 21 |
| 543 | 305.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 547 | 305.39 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 567 | 305.45 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 583 | 305.48 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 585 | 305.49 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 618 | 305.57 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 639 | 305.61 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 648 | 305.63 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 17 |
| 650 | 305.63 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 682 | 305.71 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 691 | 305.75 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 710 | 305.79 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 735 | 305.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 849 | 306.13 | humidity | 80 | 1440 | < th | dose dependent | sin | 18 | NA |
| 861 | 306.15 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 936 | 306.30 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 955 | 306.33 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |