Os01g0365300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0365300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 222.83 | 0.701 | 2.98 | -0.0191 | 0.036 | -0.818 | -0.476 | -0.343 | -0.0337 | 5.19 | 20.03 | 531 | -- | -- |
| 223.14 | 0.696 | 2.97 | 0.0383 | 0.0419 | -0.779 | -0.399 | -- | -0.025 | 4.86 | 20.1 | 523 | -- | -- |
| 223.27 | 0.696 | 2.98 | -0.0149 | 0.0341 | -0.797 | -- | -0.27 | -0.0397 | 5.61 | 20.01 | 510 | -- | -- |
| 223.44 | 0.696 | 2.97 | 0.0283 | 0.0396 | -0.768 | -- | -- | -0.0253 | 5.79 | 20 | 501 | -- | -- |
| 223.3 | 0.696 | 2.97 | -0.0093 | -- | -0.811 | -- | -0.279 | -0.0287 | -- | 20 | 501 | -- | -- |
| 239.09 | 0.725 | 3 | -0.233 | 0.153 | -- | -0.0699 | -- | -0.171 | 7.76 | -- | -- | -- | -- |
| 239.1 | 0.724 | 3 | -0.234 | 0.153 | -- | -- | -- | -0.171 | 7.97 | -- | -- | -- | -- |
| 223.53 | 0.696 | 2.97 | 0.0352 | -- | -0.779 | -- | -- | -0.0192 | -- | 20.01 | 501 | -- | -- |
| 223.46 | 0.696 | 2.97 | -- | 0.0386 | -0.766 | -- | -- | -0.0245 | 6.01 | 20 | 500 | -- | -- |
| 240.37 | 0.724 | 3 | -0.233 | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
| 240.54 | 0.725 | 2.99 | -- | 0.151 | -- | -- | -- | -0.145 | 8.08 | -- | -- | -- | -- |
| 223.56 | 0.696 | 2.97 | -- | -- | -0.768 | -- | -- | -0.0251 | -- | 20.06 | 501 | -- | -- |
| 241.8 | 0.726 | 3 | -- | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 219.23 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 16 | 219.81 | humidity | 60.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 31 | 219.93 | radiation | 40.0 | 30 | > th | dose independent | rect. | 14 | 21 |
| 33 | 219.98 | radiation | 40.0 | 30 | > th | dose independent | rect. | 9 | 2 |
| 111 | 220.67 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 1 |
| 114 | 220.67 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 117 | 220.90 | radiation | 10.0 | 30 | < th | dose independent | rect. | 13 | 2 |
| 118 | 220.90 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 147 | 221.12 | radiation | 40.0 | 30 | > th | dose independent | sin | 12 | NA |
| 156 | 221.45 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 11 |
| 263 | 222.67 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 264 | 222.72 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 22 |
| 272 | 222.82 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 18 |
| 285 | 223.16 | radiation | 40.0 | 30 | < th | dose independent | sin | 12 | NA |
| 299 | 223.73 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 311 | 224.00 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 315 | 224.09 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 317 | 224.12 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 320 | 224.14 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 13 |
| 326 | 224.16 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 5 |
| 344 | 224.31 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 20 |
| 397 | 224.54 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 411 | 224.64 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 424 | 224.74 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 425 | 224.74 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 429 | 224.79 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 432 | 224.80 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 449 | 224.85 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 23 |
| 469 | 224.90 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 22 |
| 481 | 224.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 17 |
| 507 | 225.02 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 513 | 225.04 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 514 | 225.05 | temperature | 20.0 | 720 | < th | dose independent | rect. | 2 | 20 |
| 516 | 225.05 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 22 |
| 538 | 225.15 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 551 | 225.18 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 557 | 225.20 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 569 | 225.23 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 19 |
| 573 | 225.25 | temperature | 20.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 575 | 225.26 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 578 | 225.26 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 12 |
| 583 | 225.28 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 17 |
| 587 | 225.29 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 647 | 225.41 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 15 |
| 655 | 225.43 | temperature | 25.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 669 | 225.46 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 6 |
| 670 | 225.46 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 680 | 225.49 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 701 | 225.55 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 22 |
| 708 | 225.58 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 18 |
| 711 | 225.58 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 2 |
| 723 | 225.60 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 725 | 225.60 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 23 |
| 736 | 225.62 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 16 |
| 742 | 225.62 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 24 | 10 |
| 786 | 225.73 | humidity | 70.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 796 | 225.75 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 18 |
| 820 | 225.80 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |
| 840 | 225.82 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 23 |
| 854 | 225.85 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 855 | 225.85 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 20 | 14 |
| 866 | 225.87 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 16 | 18 |
| 881 | 225.91 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 906 | 225.95 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 7 | 4 |
| 946 | 225.99 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 998 | 226.03 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 14 |