Os01g0364800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EGF-like calcium-binding domain containing protein.
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Os01g0364800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EGF-like calcium-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.24 | 0.56 | 9.31 | -0.497 | 1.36 | 1.88 | -0.253 | -2.58 | 0.746 | 2.47 | 20.5 | 1291 | -- | -- |
| 155.23 | 0.58 | 9.24 | -0.0269 | 1.38 | 2.3 | -0.538 | -- | 0.854 | 2.52 | 20.38 | 1275 | -- | -- |
| 142.4 | 0.556 | 9.31 | -0.492 | 1.35 | 1.87 | -- | -2.6 | 0.747 | 2.46 | 20.57 | 1272 | -- | -- |
| 153.74 | 0.577 | 9.23 | -0.126 | 1.38 | 2.73 | -- | -- | 0.875 | 2.47 | 19.49 | 1333 | -- | -- |
| 243 | 0.726 | 9.31 | -0.478 | -- | 2.04 | -- | -2.36 | 0.722 | -- | 20.73 | 1085 | -- | -- |
| 268.94 | 0.769 | 9.13 | 0.876 | 1.5 | -- | -0.821 | -- | 1.34 | 2.51 | -- | -- | -- | -- |
| 271.28 | 0.771 | 9.13 | 0.897 | 1.49 | -- | -- | -- | 1.35 | 2.41 | -- | -- | -- | -- |
| 249.83 | 0.736 | 9.24 | -0.0922 | -- | 2.84 | -- | -- | 0.881 | -- | 19.6 | 1086 | -- | -- |
| 154.11 | 0.578 | 9.23 | -- | 1.38 | 2.66 | -- | -- | 0.898 | 2.45 | 19.48 | 1332 | -- | -- |
| 403.13 | 0.938 | 9.11 | 0.961 | -- | -- | -- | -- | 1.39 | -- | -- | -- | -- | -- |
| 292.51 | 0.8 | 9.15 | -- | 1.51 | -- | -- | -- | 1.25 | 2.42 | -- | -- | -- | -- |
| 249.92 | 0.736 | 9.23 | -- | -- | 2.71 | -- | -- | 0.891 | -- | 19.65 | 1079 | -- | -- |
| 427.47 | 0.965 | 9.14 | -- | -- | -- | -- | -- | 1.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 2 | 139.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 23 | 141.70 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 27 | 141.90 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 32 | 142.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 33 | 142.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 54 | 142.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 68 | 142.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 112 | 143.69 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 121 | 143.87 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 133 | 144.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 138 | 144.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 258 | 145.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 274 | 146.03 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 296 | 146.28 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 321 | 146.63 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 355 | 147.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 370 | 147.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 372 | 147.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 375 | 147.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 378 | 147.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 398 | 147.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 404 | 147.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 407 | 147.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 488 | 149.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 496 | 149.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 500 | 149.35 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 512 | 149.49 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 517 | 149.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 528 | 149.64 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 535 | 149.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 627 | 150.76 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 667 | 151.13 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 685 | 151.29 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 688 | 151.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 14 |
| 755 | 151.85 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 766 | 151.92 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 807 | 152.36 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 821 | 152.49 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 822 | 152.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 825 | 152.52 | humidity | 70 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 838 | 152.63 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 865 | 152.80 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 883 | 152.96 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 941 | 153.27 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 20 |
| 955 | 153.35 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 994 | 153.57 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |