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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0362800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.83 (0.038) R2 : 0.557
β1 : -1.22 (0.146) R2dD : 0.0798 R2D : -0.242
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.52 (0.174) R2dE : 0.0911 R2E : -0.275
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -2.03 (0.0849) R2dN8 : 0.839 R2N8 : 0.432
σ : 0.7
deviance : 225.71
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 3.309
memory length : 976
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
213.4 0.686 6.94 -1.96 0.227 1.36 0.782 -3.54 -2.23 22.5 15.82 1183 -- --
223.61 0.696 6.84 -1.19 0.197 1.41 0.448 -- -2.02 22.3 14.2 1145 -- --
215.38 0.684 6.93 -1.91 0.273 1.35 -- -3.23 -2.21 23 15.45 1270 -- --
224.24 0.697 6.84 -1.21 0.205 1.4 -- -- -2.02 23.4 14.16 1143 -- --
218.39 0.688 6.92 -1.87 -- 1.53 -- -3.07 -2.21 -- 13.77 1127 -- --
253.98 0.747 6.78 -0.781 0.384 -- 0.371 -- -1.78 23.7 -- -- -- --
254.52 0.747 6.78 -0.797 0.383 -- -- -- -1.78 0.0177 -- -- -- --
225.71 0.7 6.83 -1.22 -- 1.52 -- -- -2.03 -- 3.309 976 -- --
257.71 0.748 6.79 -- 0.255 0.869 -- -- -1.81 23.5 12.68 1137 -- --
263.75 0.759 6.78 -0.785 -- -- -- -- -1.77 -- -- -- -- --
271.25 0.77 6.76 -- 0.373 -- -- -- -1.69 23.9 -- -- -- --
260.21 0.751 6.79 -- -- 1.05 -- -- -1.82 -- 10.27 915 -- --
280 0.781 6.76 -- -- -- -- -- -1.69 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 208.10 humidity 90 4320 > th dose independent rect. 18 1
2 208.31 humidity 90 14400 > th dose dependent rect. 20 5
3 208.46 humidity 90 14400 > th dose dependent rect. 18 7
4 208.64 humidity 90 14400 > th dose dependent rect. 21 3
13 209.77 temperature 15 720 > th dose dependent rect. 18 17
23 210.13 radiation 1 14400 > th dose independent rect. 18 12
38 211.02 humidity 90 14400 > th dose dependent sin 15 NA
46 211.35 humidity 90 4320 > th dose dependent rect. 18 1
49 211.46 radiation 30 4320 < th dose independent rect. 23 9
50 211.47 temperature 15 720 > th dose dependent rect. 14 21
51 211.49 temperature 10 1440 > th dose dependent rect. 3 5
55 211.53 temperature 25 1440 < th dose dependent rect. 5 1
63 211.60 temperature 30 1440 < th dose dependent rect. 3 5
72 211.68 temperature 30 1440 < th dose dependent rect. 18 15
109 211.85 temperature 25 1440 < th dose dependent rect. 3 1
113 211.86 temperature 10 1440 > th dose dependent rect. 5 2
137 211.96 temperature 20 1440 > th dose dependent rect. 20 1
143 211.98 temperature 25 1440 < th dose dependent rect. 21 9
205 212.21 temperature 15 1440 > th dose dependent sin 11 NA
206 212.21 temperature 15 1440 > th dose dependent rect. 3 1
210 212.22 wind 9 43200 > th dose independent rect. 18 20
215 212.24 temperature 10 720 > th dose dependent sin 8 NA
292 212.46 temperature 10 1440 > th dose dependent rect. 20 3
314 212.52 wind 9 43200 < th dose independent rect. 18 20
340 212.58 temperature 25 1440 < th dose dependent rect. 22 1
347 212.59 temperature 10 1440 > th dose dependent rect. 20 1
359 212.61 temperature 30 1440 < th dose dependent rect. 20 3
374 212.65 temperature 30 720 < th dose dependent rect. 20 17
383 212.69 temperature 30 1440 < th dose dependent sin 10 NA
500 212.95 wind 3 43200 < th dose independent rect. 20 2
504 212.95 humidity 90 14400 > th dose dependent rect. 12 19
604 213.20 wind 9 43200 < th dose independent rect. 6 8
613 213.21 humidity 90 14400 > th dose dependent rect. 17 17
633 213.25 humidity 90 14400 > th dose dependent rect. 17 15
646 213.28 wind 9 43200 > th dose independent rect. 8 6
648 213.28 radiation 20 4320 > th dose dependent rect. 6 2
676 213.32 wind 9 43200 > th dose dependent sin 19 NA
731 213.45 wind 9 43200 > th dose dependent rect. 10 22
738 213.47 wind 9 43200 > th dose dependent rect. 10 15
754 213.50 wind 9 43200 > th dose dependent rect. 10 17
777 213.54 wind 9 43200 > th dose dependent rect. 9 12
803 213.58 humidity 90 14400 > th dose dependent rect. 18 22
804 213.59 wind 3 43200 > th dose independent rect. 20 2
833 213.64 wind 9 43200 > th dose independent rect. 22 17
855 213.67 wind 9 43200 > th dose independent rect. 13 22
874 213.72 humidity 90 4320 > th dose dependent rect. 6 16
879 213.74 wind 9 43200 < th dose independent rect. 2 12
893 213.78 temperature 20 1440 > th dose independent rect. 20 6
928 213.84 humidity 90 14400 > th dose dependent rect. 6 23
939 213.87 wind 9 43200 < th dose independent rect. 22 17
947 213.90 wind 9 43200 > th dose independent rect. 2 13
955 213.91 wind 9 43200 < th dose independent rect. 13 22
962 213.93 radiation 1 14400 < th dose independent rect. 23 7
969 213.94 radiation 1 14400 > th dose independent rect. 4 2
974 213.94 temperature 20 1440 < th dose independent rect. 20 6
986 213.96 radiation 1 14400 > th dose independent rect. 18 1
998 213.97 radiation 1 14400 < th dose independent rect. 21 9