Os01g0362000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0362000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.19 | 0.267 | 10.1 | -0.144 | 0.522 | 0.12 | 0.137 | -3.18 | -0.0525 | 19.1 | 18.78 | 4543 | -- | -- |
| 40.59 | 0.299 | 9.96 | 0.715 | 0.502 | 0.3 | 0.242 | -- | 0.169 | 19.8 | 12.34 | 10271 | -- | -- |
| 32.23 | 0.264 | 10.1 | -0.143 | 0.523 | 0.121 | -- | -3.18 | -0.052 | 19.1 | 18.68 | 4480 | -- | -- |
| 40.74 | 0.297 | 9.96 | 0.655 | 0.525 | 0.215 | -- | -- | 0.152 | 19 | 11.3 | 10303 | -- | -- |
| 46.62 | 0.318 | 10.1 | -0.196 | -- | 0.129 | -- | -3.29 | -0.0696 | -- | 19.47 | 4426 | -- | -- |
| 41.44 | 0.302 | 9.95 | 0.771 | 0.523 | -- | 0.179 | -- | 0.211 | 19.1 | -- | -- | -- | -- |
| 41.52 | 0.302 | 9.95 | 0.768 | 0.524 | -- | -- | -- | 0.212 | 19.1 | -- | -- | -- | -- |
| 54.36 | 0.345 | 9.95 | 0.697 | -- | 0.336 | -- | -- | 0.157 | -- | 6.137 | 12161 | -- | -- |
| 44.12 | 0.309 | 10 | -- | 0.523 | 0.593 | -- | -- | -0.0473 | 19 | -3.878 | 43142 | -- | -- |
| 55.98 | 0.35 | 9.94 | 0.758 | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
| 57.06 | 0.353 | 9.97 | -- | 0.516 | -- | -- | -- | 0.126 | 19.2 | -- | -- | -- | -- |
| 58.36 | 0.356 | 10 | -- | -- | 0.592 | -- | -- | -0.0555 | -- | -5.988 | 42446 | -- | -- |
| 71.12 | 0.394 | 9.96 | -- | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.73 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 5 | 31.85 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 5 |
| 12 | 31.95 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 14 |
| 14 | 31.97 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 24 | 31.98 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 16 |
| 41 | 32.02 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 19 | NA |
| 81 | 32.10 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 142 | 32.23 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 162 | 32.27 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 203 | 32.34 | temperature | 20.0 | 4320 | > th | dose dependent | no | NA | NA |
| 212 | 32.35 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 216 | 32.35 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 224 | 32.36 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 238 | 32.37 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 249 | 32.39 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 293 | 32.45 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 310 | 32.47 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 372 | 32.58 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 375 | 32.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 376 | 32.58 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 378 | 32.58 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 383 | 32.59 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 390 | 32.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 6 |
| 391 | 32.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 6 |
| 438 | 32.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 443 | 32.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 6 |
| 477 | 32.68 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 503 | 32.70 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 627 | 32.77 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 653 | 32.78 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 672 | 32.79 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 673 | 32.79 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 686 | 32.80 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 692 | 32.80 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 693 | 32.80 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 705 | 32.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 708 | 32.81 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 711 | 32.81 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 716 | 32.81 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 718 | 32.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 738 | 32.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 747 | 32.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 764 | 32.83 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 866 | 32.86 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 912 | 32.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 916 | 32.88 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 931 | 32.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 953 | 32.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 975 | 32.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 995 | 32.90 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 997 | 32.90 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |