Os01g0361800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0361800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.69 | 0.411 | 7.05 | 0.381 | 0.774 | 0.562 | 1.01 | 0.00688 | 0.215 | 4.62 | 23.86 | 75 | -- | -- |
| 76.69 | 0.408 | 7.05 | 0.381 | 0.776 | 0.558 | 1.02 | -- | 0.215 | 4.62 | 23.53 | 73 | -- | -- |
| 78.87 | 0.414 | 7.05 | 0.384 | 0.786 | 0.571 | -- | 0.371 | 0.21 | 4.46 | 27.83 | 75 | -- | -- |
| 79.42 | 0.415 | 7.05 | 0.375 | 0.779 | 0.558 | -- | -- | 0.209 | 4.61 | 22.98 | 74 | -- | -- |
| 84.38 | 0.428 | 7.06 | 0.41 | -- | 0.988 | -- | 0.608 | 0.217 | -- | 2.523 | 394 | -- | -- |
| 82.33 | 0.425 | 7.06 | 0.367 | 1.14 | -- | 0.849 | -- | 0.178 | 3.06 | -- | -- | -- | -- |
| 84.7 | 0.431 | 7.06 | 0.349 | 1.14 | -- | -- | -- | 0.173 | 3.01 | -- | -- | -- | -- |
| 85.75 | 0.431 | 7.06 | 0.415 | -- | 0.969 | -- | -- | 0.213 | -- | 2.509 | 370 | -- | -- |
| 82.85 | 0.424 | 7.05 | -- | 0.782 | 0.555 | -- | -- | 0.172 | 4.74 | 19.96 | 68 | -- | -- |
| 159.26 | 0.59 | 7.06 | 0.398 | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
| 87.91 | 0.439 | 7.07 | -- | 1.15 | -- | -- | -- | 0.134 | 3.01 | -- | -- | -- | -- |
| 90.25 | 0.442 | 7.07 | -- | -- | 0.99 | -- | -- | 0.172 | -- | 3.227 | 383 | -- | -- |
| 163.42 | 0.597 | 7.07 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.20 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 2 | 72.36 | wind | 5.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 4 | 72.49 | wind | 5.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 28 | 73.18 | wind | 5.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 39 | 73.31 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 44 | 73.43 | wind | 5.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 45 | 73.51 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 67 | 73.76 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 15 |
| 82 | 73.92 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 98 | 74.03 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 153 | 74.24 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 158 | 74.27 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 241 | 74.60 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 275 | 74.74 | humidity | 60.0 | 720 | < th | dose independent | rect. | 18 | 15 |
| 287 | 74.76 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 11 |
| 331 | 74.92 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 342 | 74.95 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 2 | 13 |
| 366 | 75.02 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 12 |
| 396 | 75.12 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 417 | 75.18 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 11 |
| 432 | 75.23 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 6 | 11 |
| 450 | 75.28 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 17 |
| 461 | 75.31 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 4 | 18 |
| 466 | 75.33 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 496 | 75.37 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 22 | 18 |
| 511 | 75.41 | humidity | 80.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 512 | 75.41 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 528 | 75.44 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 533 | 75.45 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 9 | 5 |
| 537 | 75.47 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 3 |
| 564 | 75.51 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 2 | 14 |
| 568 | 75.52 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 572 | 75.53 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 620 | 75.62 | atmosphere | 1005.0 | 720 | > th | dose independent | sin | 5 | NA |
| 622 | 75.62 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 627 | 75.62 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 644 | 75.64 | radiation | 10.0 | 30 | < th | dose independent | rect. | 4 | 18 |
| 709 | 75.69 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 732 | 75.73 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 16 |
| 750 | 75.76 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 757 | 75.78 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 3 | 2 |
| 767 | 75.78 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 17 |
| 826 | 75.84 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 828 | 75.85 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 837 | 75.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 11 |
| 846 | 75.86 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 847 | 75.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 855 | 75.88 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 860 | 75.89 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 862 | 75.89 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 868 | 75.90 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 903 | 75.93 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 2 |
| 908 | 75.93 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 916 | 75.94 | radiation | 30.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 919 | 75.94 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 930 | 75.96 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 932 | 75.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 934 | 75.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 11 |
| 936 | 75.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 942 | 75.97 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 944 | 75.97 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 12 |
| 961 | 75.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 963 | 75.98 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 967 | 75.99 | atmosphere | 1005.0 | 720 | < th | dose independent | sin | 4 | NA |
| 971 | 75.99 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 10 |