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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0357000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Flavin monoxygenase-like protein floozy.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.42 (0.0349) R2 : 0.229
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.05 (0.102) R2dE : 0.221 R2E : 0.00289
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.73 (0.0792) R2dN8 : 0.226 R2N8 : 0.00784
σ : 0.64
deviance : 188.59
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 22.38
memory length : 3148
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.84 0.63 4.52 0.538 0.259 2.38 0.269 2.72 0.73 18.7 19.3 6288 -- --
185.99 0.635 4.41 0.819 0.252 1.67 0.195 -- 0.819 18.5 19.7 7756 -- --
178.55 0.622 4.53 0.573 0.256 2.57 -- 2.95 0.707 18.2 18.9 6376 -- --
186.13 0.635 4.4 0.815 0.252 1.66 -- -- 0.814 18.4 19.69 7718 -- --
181.31 0.627 4.55 0.559 -- 2.94 -- 3.87 0.699 -- 18.7 6437 -- --
225.87 0.705 4.51 -0.363 0.253 -- 0.192 -- 0.345 18.1 -- -- -- --
225.95 0.704 4.51 -0.364 0.254 -- -- -- 0.346 17.9 -- -- -- --
189.47 0.641 4.4 0.811 -- 1.67 -- -- 0.807 -- 19.7 7598 -- --
185.96 0.635 4.44 -- 0.238 1.02 -- -- 0.752 18.3 22.3 3291 -- --
229.3 0.708 4.51 -0.372 -- -- -- -- 0.34 -- -- -- -- --
229.45 0.709 4.5 -- 0.26 -- -- -- 0.386 17.9 -- -- -- --
188.59 0.64 4.42 -- -- 1.05 -- -- 0.73 -- 22.38 3148 -- --
232.95 0.712 4.5 -- -- -- -- -- 0.381 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 179.23 temperature 25 4320 < th dose dependent rect. 2 2
25 180.04 temperature 20 14400 < th dose dependent rect. 5 1
28 180.09 temperature 10 4320 > th dose dependent rect. 3 1
38 180.29 temperature 10 4320 > th dose dependent rect. 2 4
82 180.76 temperature 10 4320 > th dose dependent rect. 5 1
88 180.81 humidity 70 43200 > th dose independent rect. 1 8
137 181.11 humidity 60 43200 < th dose dependent rect. 11 2
166 181.34 humidity 60 43200 < th dose dependent rect. 20 17
181 181.47 humidity 70 43200 < th dose independent rect. 24 9
184 181.47 humidity 60 43200 < th dose dependent rect. 3 10
200 181.52 humidity 70 43200 < th dose independent rect. 3 6
213 181.56 humidity 70 43200 > th dose independent rect. 7 2
241 181.72 temperature 25 4320 < th dose dependent sin 10 NA
250 181.78 temperature 25 4320 < th dose dependent rect. 13 18
283 181.89 humidity 60 43200 < th dose dependent sin 7 NA
288 181.92 humidity 70 43200 < th dose independent rect. 7 2
469 182.72 temperature 25 4320 < th dose dependent rect. 22 16
489 182.82 humidity 70 43200 < th dose dependent rect. 8 1
571 183.23 wind 9 43200 > th dose independent rect. 9 8
670 183.61 wind 9 43200 > th dose independent rect. 10 4
679 183.64 humidity 60 43200 < th dose independent rect. 20 15
737 183.85 radiation 1 43200 < th dose independent rect. 18 11
757 183.89 atmosphere 1015 14400 < th dose independent rect. 19 2
761 183.90 atmosphere 1015 14400 < th dose independent rect. 18 4
762 183.90 atmosphere 1015 14400 < th dose independent rect. 9 14
768 183.92 atmosphere 1015 14400 > th dose independent rect. 8 14
772 183.92 temperature 25 4320 < th dose dependent no NA NA
779 183.94 atmosphere 1015 14400 < th dose independent sin 21 NA
785 183.95 atmosphere 1015 14400 > th dose independent sin 21 NA
791 183.95 atmosphere 1015 14400 < th dose independent rect. 11 15
797 183.96 atmosphere 1015 14400 < th dose independent rect. 11 2
805 183.97 atmosphere 1015 14400 < th dose independent sin 18 NA
807 183.97 radiation 1 43200 < th dose independent rect. 18 2
818 183.98 atmosphere 1015 14400 > th dose independent rect. 10 4
824 183.98 atmosphere 1015 14400 > th dose dependent rect. 5 18
825 183.99 radiation 1 43200 < th dose independent rect. 18 6
836 184.00 atmosphere 1015 14400 > th dose independent rect. 11 2
838 184.00 atmosphere 1015 14400 < th dose independent rect. 9 7
839 184.00 wind 9 43200 < th dose independent rect. 9 8
843 184.00 atmosphere 1015 14400 > th dose dependent rect. 9 4
852 184.01 atmosphere 1015 14400 > th dose independent rect. 9 7
874 184.02 atmosphere 1015 14400 > th dose dependent rect. 8 7
886 184.03 wind 9 43200 > th dose independent sin 21 NA
888 184.03 atmosphere 1015 14400 < th dose independent rect. 10 4
892 184.03 atmosphere 1015 14400 > th dose independent rect. 8 10
901 184.03 atmosphere 1015 14400 > th dose dependent sin 0 NA
933 184.04 atmosphere 1015 14400 > th dose dependent rect. 7 10
948 184.05 radiation 1 43200 > th dose independent rect. 18 11
953 184.05 temperature 10 4320 > th dose dependent sin 10 NA
954 184.05 atmosphere 1015 14400 > th dose dependent no NA NA
955 184.05 atmosphere 1015 14400 > th dose dependent rect. 10 2
961 184.05 atmosphere 1015 14400 > th dose dependent rect. 6 13