Os01g0355400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0355400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.45 | 0.411 | 3.67 | 0.0823 | 0.636 | 1.35 | 0.352 | 2.42 | -0.148 | 6.81 | 22.67 | 382 | -- | -- |
| 80.96 | 0.419 | 3.63 | 0.326 | 0.652 | 0.849 | 0.796 | -- | -0.0874 | 6.82 | 23.91 | 375 | -- | -- |
| 76.72 | 0.408 | 3.68 | 0.07 | 0.636 | 1.37 | -- | 2.57 | -0.152 | 6.71 | 22.68 | 389 | -- | -- |
| 82.61 | 0.423 | 3.63 | 0.331 | 0.657 | 0.83 | -- | -- | -0.0899 | 6.72 | 23.96 | 375 | -- | -- |
| 97.03 | 0.459 | 3.69 | 0.0806 | -- | 1.74 | -- | 3.1 | -0.123 | -- | 22.38 | 398 | -- | -- |
| 90.42 | 0.446 | 3.66 | 0.117 | 0.724 | -- | 0.761 | -- | -0.233 | 6.69 | -- | -- | -- | -- |
| 91.86 | 0.449 | 3.67 | 0.129 | 0.728 | -- | -- | -- | -0.235 | 6.59 | -- | -- | -- | -- |
| 99.05 | 0.464 | 3.63 | 0.418 | -- | 1.09 | -- | -- | 0.00746 | -- | 28.5 | 408 | -- | -- |
| 85.24 | 0.43 | 3.64 | -- | 0.659 | 0.67 | -- | -- | -0.137 | 6.68 | 24.7 | 377 | -- | -- |
| 119.44 | 0.511 | 3.68 | 0.146 | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
| 92.3 | 0.449 | 3.67 | -- | 0.729 | -- | -- | -- | -0.25 | 6.58 | -- | -- | -- | -- |
| 103.23 | 0.473 | 3.65 | -- | -- | 0.942 | -- | -- | -0.068 | -- | 28.8 | 405 | -- | -- |
| 120.01 | 0.511 | 3.68 | -- | -- | -- | -- | -- | -0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.11 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 4 | 72.83 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 11 | 73.55 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 15 | 73.96 | temperature | 25.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 16 | 73.97 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 74 | 75.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 18 | 14 |
| 94 | 75.35 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 112 | 75.60 | temperature | 25.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 158 | 76.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 11 |
| 167 | 76.17 | temperature | 20.0 | 270 | > th | dose independent | sin | 8 | NA |
| 184 | 76.28 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 9 |
| 212 | 76.52 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 7 |
| 243 | 76.81 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 250 | 76.88 | temperature | 20.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 264 | 76.93 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 303 | 77.15 | temperature | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 306 | 77.16 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 362 | 77.40 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 394 | 77.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 23 |
| 532 | 78.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 557 | 78.15 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 562 | 78.16 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 566 | 78.18 | temperature | 25.0 | 720 | < th | dose independent | sin | 13 | NA |
| 684 | 78.43 | temperature | 20.0 | 270 | < th | dose independent | rect. | 8 | 23 |
| 688 | 78.44 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 753 | 78.57 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 855 | 78.81 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 896 | 78.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 897 | 78.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 918 | 79.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 920 | 79.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 935 | 79.04 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 953 | 79.08 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 984 | 79.15 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 999 | 79.18 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |