Os01g0355100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Jasmonate-induced protein.
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Os01g0355100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Jasmonate-induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.67 | 0.432 | 2.97 | 1.96 | 0.127 | 15 | 0.119 | -93.1 | -0.00626 | 8 | 1 | 7 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 89.78 | 0.444 | 3.29 | 0.117 | 0.152 | -- | 0.178 | -- | -0.0197 | 7.52 | -- | -- | -- | -- |
| 89.87 | 0.444 | 3.29 | 0.12 | 0.153 | -- | -- | -- | -0.0202 | 7.33 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 91.11 | 0.446 | 3.29 | 0.123 | -- | -- | -- | -- | -0.0177 | -- | -- | -- | -- | -- |
| 90.25 | 0.444 | 3.29 | -- | 0.154 | -- | -- | -- | -0.0336 | 7.28 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 91.51 | 0.447 | 3.3 | -- | -- | -- | -- | -- | -0.0313 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.54 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 16 | 78.18 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 6 | 4 |
| 36 | 79.66 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 2 |
| 40 | 79.78 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 1 |
| 56 | 80.39 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 105 | 81.56 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 178 | 82.44 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 209 | 82.69 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 216 | 82.77 | atmosphere | 1000 | 720 | < th | dose dependent | sin | 7 | NA |
| 245 | 83.04 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 6 | 5 |
| 269 | 83.22 | wind | 3 | 30 | > th | dose independent | rect. | 9 | 1 |
| 294 | 83.42 | wind | 1 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 298 | 83.43 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 356 | 83.83 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 3 | 8 |
| 361 | 83.85 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 379 | 83.93 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 385 | 83.96 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 2 |
| 386 | 83.97 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 393 | 84.02 | temperature | 25 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 401 | 84.05 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 23 | 23 |
| 403 | 84.06 | humidity | 90 | 90 | > th | dose dependent | rect. | 8 | 2 |
| 429 | 84.11 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 430 | 84.12 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 2 |
| 435 | 84.14 | humidity | 80 | 10 | < th | dose independent | rect. | 9 | 1 |
| 442 | 84.15 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 468 | 84.22 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 491 | 84.27 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 1 | 16 |
| 513 | 84.31 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 524 | 84.33 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 525 | 84.33 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 548 | 84.38 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 555 | 84.39 | humidity | 90 | 720 | > th | dose independent | rect. | 2 | 2 |
| 557 | 84.39 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 565 | 84.40 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 577 | 84.43 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 586 | 84.44 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 596 | 84.46 | humidity | 80 | 14400 | < th | dose dependent | rect. | 1 | 8 |
| 601 | 84.47 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 603 | 84.47 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 614 | 84.49 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 647 | 84.54 | humidity | 90 | 720 | < th | dose independent | rect. | 24 | 4 |
| 654 | 84.55 | atmosphere | 995 | 1440 | > th | dose independent | sin | 4 | NA |
| 657 | 84.56 | atmosphere | 995 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 702 | 84.56 | atmosphere | 995 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 753 | 84.58 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 22 | 12 |
| 758 | 84.59 | atmosphere | 995 | 1440 | < th | dose independent | sin | 6 | NA |
| 760 | 84.59 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 770 | 84.60 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 19 | 16 |
| 771 | 84.60 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 784 | 84.61 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 23 | 8 |
| 788 | 84.62 | atmosphere | 995 | 1440 | > th | dose independent | sin | 15 | NA |
| 866 | 84.65 | atmosphere | 995 | 1440 | < th | dose independent | sin | 0 | NA |
| 890 | 84.65 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 892 | 84.65 | atmosphere | 995 | 1440 | < th | dose dependent | sin | 1 | NA |
| 904 | 84.66 | atmosphere | 995 | 1440 | < th | dose independent | sin | 22 | NA |
| 910 | 84.66 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 916 | 84.66 | atmosphere | 995 | 1440 | < th | dose dependent | sin | 22 | NA |
| 919 | 84.66 | atmosphere | 1000 | 10 | < th | dose dependent | sin | 2 | NA |
| 950 | 84.67 | atmosphere | 995 | 1440 | > th | dose independent | no | NA | NA |
| 951 | 84.67 | atmosphere | 995 | 1440 | < th | dose independent | sin | 19 | NA |
| 954 | 84.67 | atmosphere | 995 | 1440 | < th | dose independent | no | NA | NA |