Os01g0353500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os01g0353500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.26 | 0.287 | 9.73 | -0.116 | 1.49 | -0.59 | 0.537 | 2.21 | -0.0757 | 8.7 | 26.12 | 89 | -- | -- |
| 38.69 | 0.292 | 9.75 | -0.341 | 1.52 | -0.402 | 0.578 | -- | -0.125 | 8.64 | 26.12 | 89 | -- | -- |
| 38.19 | 0.288 | 9.73 | -0.0935 | 1.49 | -0.607 | -- | 2.32 | -0.0768 | 8.68 | 26.25 | 87 | -- | -- |
| 39.64 | 0.293 | 9.75 | -0.321 | 1.5 | -0.392 | -- | -- | -0.127 | 8.61 | 26.1 | 71 | -- | -- |
| 120.86 | 0.512 | 9.73 | 0.157 | -- | -1.35 | -- | 1.61 | 0.0519 | -- | 24.4 | 603 | -- | -- |
| 41.05 | 0.3 | 9.76 | -0.396 | 1.53 | -- | 0.587 | -- | -0.14 | 8.3 | -- | -- | -- | -- |
| 42.11 | 0.304 | 9.76 | -0.379 | 1.53 | -- | -- | -- | -0.14 | 8.27 | -- | -- | -- | -- |
| 123.2 | 0.517 | 9.77 | -0.108 | -- | -1.31 | -- | -- | -0.00617 | -- | 24.52 | 614 | -- | -- |
| 42.25 | 0.303 | 9.75 | -- | 1.49 | -0.466 | -- | -- | -0.098 | 8.68 | 26.01 | 66 | -- | -- |
| 172.07 | 0.613 | 9.8 | -0.369 | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
| 45.9 | 0.317 | 9.75 | -- | 1.53 | -- | -- | -- | -0.0982 | 8.29 | -- | -- | -- | -- |
| 123.53 | 0.518 | 9.77 | -- | -- | -1.33 | -- | -- | 0.00915 | -- | 24.5 | 617 | -- | -- |
| 175.66 | 0.619 | 9.79 | -- | -- | -- | -- | -- | -0.0826 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.31 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 2 | 34.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 5 | 34.45 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 10 |
| 8 | 34.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 14 | 34.61 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 15 | 34.67 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 45 | 35.26 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 59 | 35.42 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 65 | 35.45 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 19 |
| 81 | 35.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 16 |
| 89 | 35.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 92 | 35.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 95 | 35.63 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 97 | 35.63 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 103 | 35.66 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 17 |
| 104 | 35.68 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 15 |
| 113 | 35.73 | temperature | 20.0 | 30 | > th | dose independent | rect. | 8 | 10 |
| 118 | 35.76 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 124 | 35.80 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 125 | 35.81 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 150 | 35.93 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 152 | 35.94 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 158 | 35.96 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 160 | 35.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 11 |
| 162 | 35.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 11 |
| 163 | 35.97 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 165 | 35.98 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 185 | 36.02 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 193 | 36.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 11 |
| 201 | 36.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 13 |
| 220 | 36.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 11 |
| 222 | 36.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 250 | 36.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 254 | 36.17 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 13 |
| 255 | 36.18 | temperature | 20.0 | 30 | > th | dose independent | rect. | 23 | 19 |
| 257 | 36.18 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 14 |
| 260 | 36.18 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 296 | 36.25 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 310 | 36.28 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 331 | 36.34 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 5 |
| 342 | 36.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 344 | 36.36 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 10 |
| 359 | 36.38 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 366 | 36.39 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 16 |
| 374 | 36.41 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 381 | 36.42 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 385 | 36.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 13 |
| 389 | 36.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 13 |
| 391 | 36.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 20 |
| 394 | 36.44 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 19 |
| 414 | 36.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 416 | 36.46 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 418 | 36.46 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 435 | 36.49 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 16 |
| 436 | 36.49 | temperature | 15.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 442 | 36.50 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 451 | 36.51 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 460 | 36.52 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 462 | 36.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 467 | 36.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 468 | 36.53 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 478 | 36.54 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 479 | 36.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 486 | 36.55 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 487 | 36.55 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 10 |
| 528 | 36.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 545 | 36.61 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 562 | 36.63 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 8 | 10 |
| 563 | 36.63 | radiation | 1.0 | 30 | > th | dose independent | rect. | 8 | 11 |
| 584 | 36.64 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 10 |
| 590 | 36.65 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 596 | 36.65 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 612 | 36.67 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 623 | 36.68 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 624 | 36.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 638 | 36.69 | temperature | 15.0 | 30 | > th | dose independent | rect. | 18 | 14 |
| 677 | 36.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 687 | 36.72 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 689 | 36.72 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 704 | 36.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 706 | 36.73 | wind | 9.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 708 | 36.73 | wind | 5.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 732 | 36.75 | humidity | 90.0 | 720 | < th | dose independent | rect. | 6 | 5 |
| 733 | 36.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 10 |
| 738 | 36.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 14 |
| 739 | 36.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 752 | 36.76 | radiation | 40.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 769 | 36.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 10 |
| 775 | 36.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 10 |
| 791 | 36.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 793 | 36.78 | radiation | 1.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 826 | 36.80 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 848 | 36.81 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 6 |
| 859 | 36.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 21 |
| 879 | 36.82 | humidity | 80.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 904 | 36.83 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 17 |
| 913 | 36.84 | humidity | 80.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 915 | 36.84 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 963 | 36.86 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 16 |
| 968 | 36.86 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 996 | 36.88 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |