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Os01g0351100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Poly [ADP-ribose] polymerase (EC 2.4.2.30) (PARP) (ADPRT) (NAD(+) ADP- ribosyltransferase) (Poly[ADP-ribose] synthetase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.72 (0.0283) R2 : 0.08
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.375 (0.0596) R2dN8 : 0.103 R2N8 : 0.08
σ : 0.533
deviance : 130.32
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
104.13 0.479 6.81 -1.07 0.261 -0.311 0.386 2.65 0.123 1.54 24.1 699 -- --
112.24 0.493 6.76 -0.704 0.225 -0.769 0.373 -- 0.205 3.04 22.33 841 -- --
104.63 0.476 6.81 -1.08 0.263 -0.31 -- 2.6 0.126 1.35 24.2 649 -- --
111.2 0.491 6.78 -0.668 0.236 -0.615 -- -- 0.238 24 19.56 2390 -- --
108.72 0.486 6.81 -1.09 -- -0.415 -- 2.48 0.11 -- 24.66 703 -- --
118.59 0.511 6.74 -0.502 0.294 -- -0.0906 -- 0.315 0.729 -- -- -- --
118.62 0.51 6.74 -0.499 0.295 -- -- -- 0.315 0.874 -- -- -- --
113.08 0.495 6.76 -0.835 -- -1.15 -- -- 0.196 -- 19.08 2297 -- --
119.2 0.511 6.73 -- 0.315 -1.74 -- -- 0.361 0.712 14.7 756 -- --
124.03 0.52 6.74 -0.488 -- -- -- -- 0.321 -- -- -- -- --
125.18 0.523 6.73 -- 0.287 -- -- -- 0.371 0.797 -- -- -- --
124.69 0.52 6.73 -- -- -1.64 -- -- 0.362 -- 14.73 749 -- --
130.32 0.533 6.72 -- -- -- -- -- 0.375 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 100.56 wind 9.0 43200 > th dose dependent rect. 18 1
2 101.06 humidity 80.0 43200 > th dose dependent rect. 12 1
4 101.19 wind 9.0 43200 > th dose independent rect. 18 1
6 101.48 humidity 90.0 43200 > th dose independent rect. 9 5
11 101.61 precipitation 0.1 43200 > th dose independent rect. 5 6
12 101.61 precipitation 0.1 43200 > th dose dependent rect. 5 6
13 101.62 precipitation 0.1 43200 > th dose independent rect. 7 3
14 101.62 precipitation 0.1 43200 > th dose dependent rect. 7 3
25 101.71 precipitation 0.1 43200 < th dose independent rect. 5 6
27 101.71 precipitation 0.1 43200 < th dose dependent rect. 5 6
28 101.73 wind 9.0 43200 < th dose independent rect. 18 1
30 101.75 precipitation 0.1 43200 < th dose independent rect. 7 3
31 101.75 precipitation 0.1 43200 < th dose dependent rect. 7 3
33 101.76 humidity 90.0 14400 > th dose dependent rect. 21 13
40 101.79 humidity 90.0 14400 > th dose dependent sin 10 NA
53 101.86 humidity 90.0 14400 > th dose dependent rect. 13 17
54 101.87 humidity 90.0 43200 < th dose independent rect. 9 4
61 101.89 humidity 90.0 14400 > th dose dependent rect. 2 8
62 101.89 humidity 90.0 14400 > th dose dependent rect. 15 15
71 101.94 humidity 90.0 14400 > th dose dependent rect. 23 11
76 101.96 humidity 90.0 14400 > th dose dependent rect. 19 9
99 102.03 temperature 25.0 720 < th dose dependent rect. 12 19
108 102.05 humidity 90.0 14400 > th dose dependent rect. 24 14
123 102.08 humidity 90.0 14400 > th dose dependent rect. 21 17
146 102.14 humidity 90.0 14400 > th dose dependent rect. 21 6
275 102.52 temperature 25.0 43200 < th dose dependent rect. 9 1
315 102.68 radiation 1.0 43200 < th dose independent rect. 12 1
318 102.69 radiation 1.0 43200 < th dose dependent rect. 12 1
322 102.72 radiation 1.0 43200 > th dose independent rect. 12 1
341 102.74 radiation 1.0 4320 < th dose dependent rect. 18 16
357 102.79 precipitation 0.1 43200 < th dose independent rect. 9 1
361 102.79 precipitation 0.1 43200 < th dose dependent rect. 9 1
367 102.80 precipitation 0.1 43200 > th dose independent rect. 9 1
368 102.80 temperature 25.0 720 < th dose dependent sin 14 NA
370 102.80 precipitation 0.1 43200 > th dose dependent rect. 9 1
379 102.82 temperature 20.0 720 < th dose independent rect. 12 19
396 102.88 temperature 20.0 43200 < th dose independent rect. 20 1
431 102.92 radiation 1.0 43200 < th dose independent rect. 7 8
439 102.94 radiation 1.0 43200 > th dose independent rect. 7 8
440 102.94 radiation 1.0 43200 < th dose dependent rect. 7 1
508 103.13 radiation 40.0 43200 < th dose independent rect. 16 5
509 103.13 humidity 90.0 14400 > th dose dependent no NA NA
511 103.13 humidity 90.0 14400 > th dose dependent rect. 23 2
519 103.15 wind 7.0 43200 > th dose independent rect. 4 9
536 103.18 wind 7.0 43200 < th dose independent rect. 4 9
541 103.18 temperature 10.0 720 > th dose dependent rect. 12 18
554 103.20 radiation 1.0 4320 < th dose dependent rect. 6 3
564 103.22 temperature 20.0 43200 > th dose independent rect. 7 1
565 103.22 temperature 20.0 43200 > th dose independent rect. 18 1
566 103.22 temperature 20.0 43200 > th dose independent rect. 20 1
569 103.22 temperature 20.0 43200 > th dose independent rect. 18 4
580 103.23 wind 7.0 43200 > th dose dependent rect. 10 3
589 103.24 radiation 1.0 43200 < th dose dependent rect. 6 9
609 103.27 wind 7.0 43200 < th dose independent rect. 10 1
613 103.27 radiation 40.0 43200 < th dose independent rect. 16 14
616 103.28 temperature 25.0 43200 < th dose independent rect. 14 1
617 103.28 humidity 90.0 14400 > th dose independent rect. 12 2
631 103.31 temperature 20.0 43200 < th dose independent rect. 7 1
650 103.33 radiation 40.0 43200 < th dose independent rect. 16 10
656 103.34 wind 7.0 43200 > th dose independent rect. 7 6
662 103.35 radiation 1.0 43200 < th dose independent rect. 7 2
670 103.36 wind 7.0 43200 > th dose independent rect. 10 1
672 103.36 wind 7.0 43200 < th dose independent rect. 7 6
696 103.39 temperature 25.0 43200 > th dose independent rect. 12 1
704 103.40 radiation 1.0 43200 > th dose independent rect. 7 2
711 103.41 temperature 25.0 43200 > th dose independent rect. 14 1
714 103.41 temperature 25.0 43200 > th dose independent rect. 12 3
740 103.43 humidity 90.0 14400 > th dose independent rect. 19 9
753 103.45 wind 7.0 43200 < th dose independent rect. 9 3
782 103.48 temperature 20.0 43200 > th dose independent rect. 5 17
783 103.48 temperature 20.0 43200 > th dose independent rect. 7 20
784 103.48 wind 3.0 43200 > th dose dependent rect. 5 1
794 103.49 radiation 1.0 14400 > th dose independent rect. 18 1
808 103.49 temperature 20.0 43200 > th dose independent rect. 7 18
823 103.51 temperature 20.0 43200 > th dose independent sin 17 NA
826 103.51 humidity 90.0 14400 > th dose independent rect. 21 3
836 103.52 temperature 20.0 43200 < th dose independent sin 17 NA
863 103.53 temperature 20.0 43200 > th dose independent rect. 7 15
877 103.54 temperature 20.0 43200 < th dose independent rect. 7 18
902 103.55 temperature 20.0 43200 < th dose independent rect. 4 18
930 103.57 radiation 1.0 14400 < th dose independent rect. 18 2
969 103.59 radiation 1.0 14400 < th dose independent rect. 18 7