Os01g0350500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0350500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 269.45 | 0.771 | 2.93 | -0.135 | 0.0193 | 0.687 | 0.774 | 0.236 | 0.0672 | 18.4 | 49.7 | 15 | -- | -- |
| 269.51 | 0.765 | 2.93 | -0.131 | 0.021 | 0.69 | 0.772 | -- | 0.0713 | 18.1 | 49.72 | 14 | -- | -- |
| 270.89 | 0.767 | 2.93 | -0.136 | 0.0283 | 0.687 | -- | 0.237 | 0.0738 | 16.9 | 49.79 | 15 | -- | -- |
| 270.96 | 0.767 | 2.93 | -0.138 | 0.0292 | 0.68 | -- | -- | 0.075 | 16.1 | 49.82 | 14 | -- | -- |
| 270.93 | 0.767 | 2.93 | -0.142 | -- | 0.701 | -- | 0.233 | 0.0728 | -- | 49.79 | 15 | -- | -- |
| 279.74 | 0.784 | 2.93 | -0.168 | 0.025 | -- | 0.773 | -- | 0.0768 | 18.3 | -- | -- | -- | -- |
| 279.61 | 0.783 | 2.93 | -0.172 | 0.163 | -- | -- | -- | 0.0819 | 13.1 | -- | -- | -- | -- |
| 271 | 0.767 | 2.93 | -0.139 | -- | 0.69 | -- | -- | 0.074 | -- | 49.78 | 14 | -- | -- |
| 271.46 | 0.767 | 2.93 | -- | 0.0307 | 0.689 | -- | -- | 0.0904 | 16.1 | 49.84 | 14 | -- | -- |
| 281.26 | 0.784 | 2.93 | -0.178 | -- | -- | -- | -- | 0.0787 | -- | -- | -- | -- | -- |
| 280.39 | 0.783 | 2.92 | -- | 0.166 | -- | -- | -- | 0.101 | 13.1 | -- | -- | -- | -- |
| 271.5 | 0.767 | 2.93 | -- | -- | 0.7 | -- | -- | 0.0894 | -- | 49.78 | 14 | -- | -- |
| 282.1 | 0.784 | 2.92 | -- | -- | -- | -- | -- | 0.0985 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.71 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 2 |
| 28 | 256.14 | humidity | 60 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 137 | 259.26 | humidity | 70 | 30 | < th | dose dependent | rect. | 9 | 2 |
| 138 | 259.28 | humidity | 60 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 144 | 259.60 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 145 | 259.68 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 3 |
| 146 | 259.68 | humidity | 80 | 90 | < th | dose dependent | rect. | 2 | 3 |
| 147 | 259.69 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 1 |
| 148 | 259.69 | humidity | 80 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 162 | 259.70 | humidity | 90 | 10 | < th | dose independent | rect. | 3 | 1 |
| 164 | 259.70 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 169 | 259.83 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 191 | 260.20 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 213 | 260.69 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 250 | 261.51 | humidity | 70 | 30 | < th | dose dependent | rect. | 16 | 19 |
| 251 | 261.51 | radiation | 40 | 30 | > th | dose dependent | rect. | 14 | 21 |
| 252 | 261.52 | humidity | 60 | 90 | < th | dose independent | rect. | 16 | 18 |
| 253 | 261.52 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 273 | 261.67 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 311 | 261.90 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 354 | 262.36 | humidity | 80 | 720 | < th | dose independent | rect. | 2 | 1 |
| 356 | 262.36 | humidity | 80 | 720 | < th | dose independent | rect. | 2 | 3 |
| 359 | 262.36 | humidity | 80 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 361 | 262.36 | humidity | 80 | 720 | < th | dose dependent | rect. | 2 | 3 |
| 367 | 262.40 | humidity | 80 | 720 | < th | dose independent | rect. | 24 | 3 |
| 370 | 262.41 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 2 |
| 406 | 262.43 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 573 | 262.54 | wind | 1 | 30 | < th | dose independent | rect. | 9 | 2 |
| 583 | 262.64 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 4 |
| 651 | 262.77 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 4 |
| 659 | 262.83 | radiation | 40 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 737 | 263.13 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 741 | 263.14 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 746 | 263.14 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 754 | 263.16 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 867 | 263.84 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 2 |
| 933 | 264.28 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 10 |