Os01g0350000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os01g0350000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.34 | 0.595 | 10.6 | 0.27 | 0.995 | 2.53 | -2.32 | -3.86 | -0.0442 | 12.6 | 20.7 | 1398 | -- | -- |
| 170.77 | 0.609 | 10.5 | 1.35 | 1.05 | 2.54 | -2.13 | -- | 0.255 | 12.7 | 18.85 | 1342 | -- | -- |
| 182.25 | 0.629 | 10.6 | 0.255 | 1.01 | 2.49 | -- | -3.68 | -0.0247 | 13 | 21.29 | 1407 | -- | -- |
| 189.31 | 0.641 | 10.5 | 1.27 | 1.13 | 2.61 | -- | -- | 0.233 | 13 | 18.91 | 1282 | -- | -- |
| 232.82 | 0.711 | 10.6 | 0.377 | -- | 2.51 | -- | -3.14 | 0.0135 | -- | 20.41 | 1621 | -- | -- |
| 344.46 | 0.87 | 10.4 | 2.28 | 0.807 | -- | -2.34 | -- | 0.824 | 12.3 | -- | -- | -- | -- |
| 367.64 | 0.898 | 10.4 | 2.19 | 0.821 | -- | -- | -- | 0.815 | 12.7 | -- | -- | -- | -- |
| 241.03 | 0.723 | 10.5 | 1.22 | -- | 2.57 | -- | -- | 0.225 | -- | 18.6 | 1634 | -- | -- |
| 226.07 | 0.7 | 10.5 | -- | 1.2 | 3.13 | -- | -- | 0.00735 | 12.4 | 18 | 2369 | -- | -- |
| 409.84 | 0.946 | 10.4 | 2.17 | -- | -- | -- | -- | 0.8 | -- | -- | -- | -- | -- |
| 494.63 | 1.04 | 10.4 | -- | 0.788 | -- | -- | -- | 0.57 | 12.6 | -- | -- | -- | -- |
| 256.81 | 0.746 | 10.6 | -- | -- | 3.43 | -- | -- | -0.258 | -- | 11.87 | 8880 | -- | -- |
| 533.54 | 1.08 | 10.4 | -- | -- | -- | -- | -- | 0.56 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 3 | 154.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 5 | 154.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 27 | 159.41 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 32 | 159.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 47 | 160.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 65 | 160.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 147 | 161.51 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 149 | 161.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 280 | 164.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 403 | 168.52 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 420 | 168.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 17 |
| 921 | 173.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 924 | 173.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 953 | 173.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 17 |