Os01g0349600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0349600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.9 | 0.51 | 9.41 | -1.37 | 0.928 | -0.958 | -1.04 | -0.29 | -0.733 | 21.5 | 91.5 | 792 | -- | -- |
| 117.73 | 0.505 | 9.41 | -1.39 | 0.933 | -0.967 | -0.926 | -- | -0.744 | 21.5 | 92 | 796 | -- | -- |
| 119.82 | 0.51 | 9.4 | -1.42 | 1.01 | -0.958 | -- | 0.634 | -0.753 | 21.3 | 92 | 851 | -- | -- |
| 120.61 | 0.511 | 9.41 | -1.38 | 1.01 | -0.967 | -- | -- | -0.729 | 21.3 | 91.99 | 861 | -- | -- |
| 159.82 | 0.589 | 9.41 | -1.27 | -- | -1.67 | -- | -0.162 | -0.84 | -- | 89.75 | 731 | -- | -- |
| 132.25 | 0.539 | 9.38 | -1.47 | 1.19 | -- | -0.735 | -- | -0.57 | 21.4 | -- | -- | -- | -- |
| 134.22 | 0.543 | 9.38 | -1.44 | 1.19 | -- | -- | -- | -0.569 | 21.4 | -- | -- | -- | -- |
| 159.87 | 0.589 | 9.41 | -1.28 | -- | -1.67 | -- | -- | -0.842 | -- | 89.76 | 733 | -- | -- |
| 166.41 | 0.601 | 9.41 | -- | 1.08 | -1.21 | -- | -- | -0.723 | 21.1 | 90 | 2554 | -- | -- |
| 217.63 | 0.689 | 9.35 | -1.43 | -- | -- | -- | -- | -0.573 | -- | -- | -- | -- | -- |
| 188.8 | 0.643 | 9.34 | -- | 1.19 | -- | -- | -- | -0.409 | 21.3 | -- | -- | -- | -- |
| 202.25 | 0.662 | 9.38 | -- | -- | -1.79 | -- | -- | -0.723 | -- | 89.4 | 751 | -- | -- |
| 271.77 | 0.769 | 9.31 | -- | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 3 | 116.36 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 4 | 116.38 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 6 | 116.44 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 9 | 116.49 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 12 | 116.67 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 29 | 116.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 30 | 117.00 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 35 | 117.09 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 41 | 117.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 42 | 117.19 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 44 | 117.21 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 46 | 117.24 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 2 | 20 |
| 57 | 117.35 | wind | 1.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 61 | 117.46 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 10 |
| 62 | 117.46 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 67 | 117.62 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 71 | 117.69 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 74 | 117.73 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 81 | 117.84 | wind | 1.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 96 | 117.99 | radiation | 20.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 98 | 118.01 | humidity | 70.0 | 90 | < th | dose independent | rect. | 6 | 7 |
| 111 | 118.04 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 113 | 118.06 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 161 | 118.42 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 14 |
| 162 | 118.42 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 14 |
| 165 | 118.44 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 169 | 118.46 | humidity | 80.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 172 | 118.53 | radiation | 20.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 173 | 118.54 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 10 |
| 193 | 118.66 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 5 | 7 |
| 195 | 118.67 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 229 | 118.86 | humidity | 70.0 | 90 | < th | dose independent | sin | 7 | NA |
| 244 | 118.89 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 272 | 119.01 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 7 | 10 |
| 282 | 119.04 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 283 | 119.05 | wind | 3.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 303 | 119.12 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 305 | 119.12 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 8 |
| 327 | 119.15 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 331 | 119.16 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 336 | 119.18 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 337 | 119.18 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 10 |
| 347 | 119.20 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 17 | 19 |
| 351 | 119.20 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 357 | 119.21 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 395 | 119.30 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 434 | 119.36 | radiation | 20.0 | 10 | > th | dose independent | rect. | 15 | 22 |
| 441 | 119.40 | humidity | 70.0 | 90 | > th | dose independent | sin | 3 | NA |
| 460 | 119.43 | humidity | 90.0 | 720 | > th | dose dependent | no | NA | NA |
| 470 | 119.45 | radiation | 20.0 | 10 | < th | dose independent | rect. | 7 | 8 |
| 520 | 119.53 | radiation | 40.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 534 | 119.56 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 555 | 119.62 | wind | 3.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 585 | 119.65 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 593 | 119.66 | radiation | 1.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 595 | 119.66 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 606 | 119.70 | radiation | 1.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 609 | 119.72 | radiation | 40.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 615 | 119.73 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 624 | 119.75 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 18 | 19 |
| 701 | 119.91 | radiation | 40.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 723 | 119.93 | radiation | 40.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 751 | 119.98 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 760 | 120.00 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 771 | 120.00 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 819 | 120.12 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 828 | 120.14 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 21 |
| 831 | 120.14 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 832 | 120.15 | humidity | 90.0 | 720 | > th | dose dependent | sin | 23 | NA |
| 846 | 120.18 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 888 | 120.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 913 | 120.29 | humidity | 90.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 916 | 120.29 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 918 | 120.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 937 | 120.34 | radiation | 40.0 | 720 | < th | dose independent | rect. | 16 | 17 |
| 938 | 120.34 | humidity | 50.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 942 | 120.35 | humidity | 80.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 951 | 120.36 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 952 | 120.36 | humidity | 80.0 | 10 | < th | dose independent | rect. | 1 | 12 |