Os01g0348000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
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Os01g0348000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C1A, papain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183.48 | 0.636 | 2.92 | -0.283 | 0.0478 | 0.546 | -0.516 | 3.49 | -0.0911 | 6.91 | 58.54 | 23 | -- | -- |
| 188.24 | 0.639 | 2.92 | -0.243 | 0.0119 | 0.589 | -0.604 | -- | -0.0805 | 6.25 | 60 | 15 | -- | -- |
| 184.1 | 0.632 | 2.92 | -0.283 | 0.0583 | 0.538 | -- | 3.44 | -0.0821 | 8.6 | 58.68 | 23 | -- | -- |
| 188.71 | 0.64 | 2.91 | -0.237 | 0.0428 | 0.62 | -- | -- | -0.069 | 8.25 | 60 | 15 | -- | -- |
| 184.27 | 0.632 | 2.92 | -0.283 | -- | 0.538 | -- | 3.44 | -0.0821 | -- | 58.68 | 23 | -- | -- |
| 189.83 | 0.646 | 2.92 | -0.235 | 0.00593 | -- | -0.593 | -- | -0.0821 | 4.33 | -- | -- | -- | -- |
| 190.56 | 0.646 | 2.91 | -0.229 | 0.0631 | -- | -- | -- | -0.0788 | 9.9 | -- | -- | -- | -- |
| 188.81 | 0.64 | 2.91 | -0.238 | -- | 0.637 | -- | -- | -0.0685 | -- | 60 | 15 | -- | -- |
| 190.19 | 0.642 | 2.9 | -- | 0.0419 | 0.601 | -- | -- | -0.044 | 8.5 | 60 | 15 | -- | -- |
| 190.8 | 0.645 | 2.91 | -0.229 | -- | -- | -- | -- | -0.0788 | -- | -- | -- | -- | -- |
| 191.94 | 0.648 | 2.91 | -- | 0.064 | -- | -- | -- | -0.0533 | 10.2 | -- | -- | -- | -- |
| 190.29 | 0.642 | 2.91 | -- | -- | 0.622 | -- | -- | -0.0428 | -- | 60 | 15 | -- | -- |
| 192.19 | 0.647 | 2.91 | -- | -- | -- | -- | -- | -0.0534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.40 | wind | 7.0 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 170.42 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 2 |
| 19 | 170.97 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 29 | 170.97 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 47 | 171.71 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 55 | 171.73 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 61 | 171.73 | humidity | 80.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 65 | 171.73 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 102 | 172.03 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 2 |
| 107 | 172.22 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 118 | 172.46 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 2 |
| 126 | 172.87 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 162 | 173.60 | wind | 9.0 | 90 | > th | dose dependent | rect. | 20 | 14 |
| 193 | 174.64 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 256 | 176.02 | wind | 7.0 | 10 | > th | dose dependent | rect. | 2 | 9 |
| 286 | 176.86 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 335 | 177.46 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 341 | 177.88 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 360 | 178.30 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 395 | 178.93 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 409 | 179.25 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 416 | 179.25 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 425 | 179.27 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 2 |
| 426 | 179.28 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 451 | 179.45 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 457 | 179.49 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 10 |
| 478 | 179.88 | wind | 9.0 | 90 | > th | dose independent | rect. | 20 | 14 |
| 504 | 180.20 | wind | 3.0 | 270 | > th | dose independent | rect. | 6 | 1 |
| 520 | 180.57 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 559 | 181.29 | humidity | 90.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 688 | 182.22 | radiation | 10.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 692 | 182.23 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 710 | 182.37 | humidity | 80.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 712 | 182.37 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 738 | 182.42 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 749 | 182.51 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 9 |
| 780 | 182.67 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 819 | 182.83 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 826 | 182.87 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 2 |
| 828 | 182.87 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 838 | 182.96 | temperature | 25.0 | 90 | < th | dose independent | rect. | 9 | 3 |
| 842 | 182.98 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 880 | 183.11 | temperature | 15.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 886 | 183.11 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 911 | 183.15 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 18 |
| 924 | 183.21 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 22 | 6 |
| 925 | 183.22 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 928 | 183.22 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 18 |
| 968 | 183.31 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 14 |