Os01g0347600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
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Os01g0347600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C1A, papain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.29 | 0.416 | 3.03 | -0.205 | 0.135 | 1.89 | -0.872 | 4.95 | -0.0313 | 5.94 | 9.3 | 7 | -- | -- |
| 83.05 | 0.424 | 3.01 | -0.176 | 0.144 | 0.522 | -0.987 | -- | -0.0143 | 5.65 | 9.444 | 5 | -- | -- |
| 80.03 | 0.417 | 3.03 | -0.219 | 0.133 | 1.81 | -- | 5.13 | -0.0304 | 7.01 | 9.383 | 6 | -- | -- |
| 85.05 | 0.43 | 3.01 | -0.194 | 0.122 | 0.666 | -- | -- | -0.00914 | 6.01 | 9.4 | 5 | -- | -- |
| 80.96 | 0.419 | 3.03 | -0.218 | -- | 1.8 | -- | 5.2 | -0.0286 | -- | 9.362 | 6 | -- | -- |
| 86.15 | 0.435 | 3.02 | -0.215 | 0.121 | -- | -0.9 | -- | -0.0386 | 5.59 | -- | -- | -- | -- |
| 87.76 | 0.439 | 3.01 | -0.217 | 0.141 | -- | -- | -- | -0.0339 | 7.85 | -- | -- | -- | -- |
| 85.94 | 0.432 | 3.01 | -0.183 | -- | 0.653 | -- | -- | -0.0156 | -- | 9.402 | 5 | -- | -- |
| 85.86 | 0.432 | 3 | -- | 0.133 | 0.69 | -- | -- | 0.00664 | 7.01 | 9.42 | 5 | -- | -- |
| 88.84 | 0.44 | 3.02 | -0.215 | -- | -- | -- | -- | -0.032 | -- | -- | -- | -- | -- |
| 89 | 0.441 | 3.01 | -- | 0.14 | -- | -- | -- | -0.00973 | 7.96 | -- | -- | -- | -- |
| 86.82 | 0.434 | 3.01 | -- | -- | 0.688 | -- | -- | 0.00542 | -- | 9.433 | 5 | -- | -- |
| 90.06 | 0.443 | 3.01 | -- | -- | -- | -- | -- | -0.00807 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.89 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 22 | 60.89 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 55 | 64.72 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 65 | 64.72 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 106 | 67.80 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 122 | 69.68 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 141 | 72.31 | humidity | 80.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 144 | 72.31 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 188 | 75.35 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 250 | 76.41 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 263 | 76.58 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 273 | 76.92 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 285 | 77.09 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 310 | 77.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 334 | 77.66 | wind | 9.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 366 | 77.83 | wind | 5.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 367 | 77.84 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 403 | 78.02 | wind | 7.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 436 | 78.23 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 449 | 78.23 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 455 | 78.26 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 456 | 78.26 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 460 | 78.30 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 482 | 78.64 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 522 | 78.78 | wind | 9.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 523 | 78.79 | wind | 7.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 535 | 78.83 | wind | 7.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 556 | 78.94 | wind | 7.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 559 | 78.95 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 592 | 79.09 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 675 | 79.40 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 840 | 79.78 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 9 |
| 845 | 79.79 | wind | 9.0 | 90 | > th | dose independent | sin | 7 | NA |
| 846 | 79.79 | wind | 9.0 | 90 | < th | dose independent | sin | 7 | NA |
| 881 | 79.84 | wind | 7.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 886 | 79.86 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 958 | 79.98 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 6 |
| 996 | 80.04 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 12 | 5 |