Os01g0347500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
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Os01g0347500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C1A, papain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.44 | 0.503 | 3.39 | 0.289 | 0.257 | 0.603 | -0.661 | -1.99 | 0.101 | 9.48 | 29.68 | 91 | -- | -- |
| 117.35 | 0.505 | 3.43 | -0.0101 | 0.296 | 0.811 | -0.658 | -- | 0.00317 | 7.93 | 22.8 | 175 | -- | -- |
| 115.93 | 0.501 | 3.39 | 0.232 | 0.256 | 0.611 | -- | -1.71 | 0.0987 | 9.44 | 29.23 | 101 | -- | -- |
| 118.24 | 0.506 | 3.44 | -0.0442 | 0.282 | 0.799 | -- | -- | -0.00817 | 8.05 | 22.82 | 176 | -- | -- |
| 119.28 | 0.509 | 3.41 | 0.224 | -- | 0.597 | -- | -1.71 | 0.0869 | -- | 29.92 | 206 | -- | -- |
| 123.76 | 0.522 | 3.46 | -0.212 | 0.293 | -- | -0.69 | -- | -0.114 | 6.78 | -- | -- | -- | -- |
| 124.97 | 0.523 | 3.46 | -0.223 | 0.291 | -- | -- | -- | -0.112 | 6.95 | -- | -- | -- | -- |
| 121.71 | 0.514 | 3.44 | -0.0419 | -- | 0.673 | -- | -- | 0.0382 | -- | 27.92 | 467 | -- | -- |
| 118.3 | 0.507 | 3.44 | -- | 0.277 | 0.787 | -- | -- | -0.00371 | 8.09 | 22.96 | 169 | -- | -- |
| 129.4 | 0.532 | 3.47 | -0.217 | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
| 126.28 | 0.526 | 3.46 | -- | 0.288 | -- | -- | -- | -0.0874 | 7 | -- | -- | -- | -- |
| 121.75 | 0.514 | 3.43 | -- | -- | 0.686 | -- | -- | 0.0448 | -- | 27.9 | 472 | -- | -- |
| 130.64 | 0.534 | 3.46 | -- | -- | -- | -- | -- | -0.0828 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.62 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 4 | 107.89 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 6 | 108.02 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 8 | 108.04 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 6 |
| 14 | 108.12 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 1 |
| 24 | 108.12 | humidity | 80 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 57 | 108.41 | temperature | 20 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 72 | 109.72 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 13 |
| 99 | 110.16 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 115 | 110.51 | temperature | 25 | 90 | < th | dose dependent | sin | 3 | NA |
| 122 | 110.65 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 132 | 110.65 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 149 | 110.87 | temperature | 10 | 90 | > th | dose dependent | sin | 4 | NA |
| 268 | 111.90 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 9 |
| 273 | 111.92 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 16 |
| 279 | 111.95 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 3 | 8 |
| 284 | 111.99 | atmosphere | 1010 | 270 | > th | dose independent | rect. | 10 | 3 |
| 296 | 112.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 350 | 112.15 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 12 |
| 392 | 112.26 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 402 | 112.29 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 416 | 112.34 | temperature | 20 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 478 | 112.56 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 12 |
| 543 | 112.80 | temperature | 20 | 10 | > th | dose independent | sin | 3 | NA |
| 569 | 112.87 | temperature | 20 | 10 | < th | dose independent | sin | 3 | NA |
| 580 | 112.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 583 | 112.93 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 23 |
| 592 | 112.96 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 8 |
| 615 | 113.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 620 | 113.03 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 621 | 113.04 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 650 | 113.14 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 3 | 23 |
| 656 | 113.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 663 | 113.17 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 13 |
| 666 | 113.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 700 | 113.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 732 | 113.30 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 5 |
| 733 | 113.30 | temperature | 25 | 90 | < th | dose dependent | rect. | 10 | 7 |
| 795 | 113.42 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 10 |
| 803 | 113.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 845 | 113.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 846 | 113.53 | atmosphere | 1010 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 855 | 113.55 | atmosphere | 1010 | 720 | > th | dose dependent | rect. | 2 | 10 |
| 873 | 113.58 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 21 |
| 890 | 113.60 | temperature | 25 | 10 | < th | dose independent | rect. | 11 | 5 |
| 894 | 113.61 | temperature | 15 | 720 | > th | dose independent | rect. | 3 | 8 |
| 904 | 113.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 914 | 113.66 | temperature | 25 | 10 | < th | dose independent | rect. | 11 | 3 |
| 971 | 113.79 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 978 | 113.81 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 980 | 113.81 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 9 |
| 991 | 113.83 | atmosphere | 1010 | 720 | > th | dose dependent | rect. | 5 | 1 |