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Os01g0343200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Importin alpha-1b subunit.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.71 (0.0136) R2 : 0.774
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0329) R2dC : 0.766 R2C : 0.758
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.141 (0.0285) R2dN8 : 0.0157 R2N8 : 0.00788
σ : 0.256
deviance : 29.92
__
_____
C
peak time of C : 13.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.96 0.23 9.68 0.0291 1.29 0.338 -0.698 -0.521 0.205 13.8 19.14 1803 -- --
24.09 0.229 9.69 -0.028 1.29 0.488 -0.803 -- 0.2 13.8 18.7 1836 -- --
25.48 0.235 9.69 0.0183 1.26 0.319 -- -0.694 0.194 13.8 18.9 1157 -- --
25.73 0.236 9.69 -0.0191 1.26 0.476 -- -- 0.195 13.8 18.3 2261 -- --
115.75 0.501 9.7 0.0885 -- 1.04 -- -0.0365 0.209 -- 18.3 948 -- --
26.97 0.243 9.71 -0.192 1.29 -- -0.67 -- 0.121 13.8 -- -- -- --
28.72 0.251 9.71 -0.213 1.29 -- -- -- 0.118 13.8 -- -- -- --
115.66 0.501 9.7 0.046 -- 1.05 -- -- 0.208 -- 18.4 937 -- --
25.74 0.236 9.69 -- 1.26 0.482 -- -- 0.195 13.8 18.3 2280 -- --
129.46 0.532 9.73 -0.266 -- -- -- -- 0.0884 -- -- -- -- --
29.92 0.256 9.71 -- 1.29 -- -- -- 0.141 13.8 -- -- -- --
115.69 0.501 9.7 -- -- 1.03 -- -- 0.202 -- 18.38 937 -- --
131.33 0.535 9.72 -- -- -- -- -- 0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.56 radiation 1.0 1440 < th dose independent rect. 13 2
2 22.56 radiation 1.0 1440 < th dose dependent rect. 13 2
5 22.71 temperature 20.0 270 > th dose independent rect. 17 18
6 22.73 radiation 1.0 1440 < th dose independent rect. 10 5
7 22.73 radiation 1.0 1440 < th dose dependent rect. 10 5
11 22.76 temperature 20.0 720 > th dose independent rect. 16 12
15 22.77 radiation 1.0 1440 < th dose independent rect. 11 1
16 22.77 radiation 1.0 1440 < th dose dependent rect. 11 1
22 22.88 atmosphere 1005.0 720 < th dose independent rect. 18 6
27 22.90 radiation 1.0 1440 > th dose independent rect. 13 2
35 22.97 atmosphere 1005.0 720 > th dose independent rect. 18 6
52 23.09 temperature 20.0 720 < th dose independent rect. 19 5
67 23.15 temperature 20.0 720 > th dose independent sin 14 NA
85 23.21 atmosphere 1005.0 720 < th dose independent rect. 21 3
121 23.35 atmosphere 1005.0 720 < th dose independent rect. 23 1
145 23.44 temperature 20.0 270 > th dose independent sin 10 NA
147 23.44 temperature 15.0 270 > th dose independent rect. 8 13
151 23.47 atmosphere 1005.0 720 > th dose independent rect. 21 3
177 23.53 humidity 70.0 14400 < th dose dependent rect. 21 1
195 23.54 temperature 20.0 720 < th dose dependent rect. 20 5
201 23.57 temperature 20.0 720 > th dose independent rect. 20 3
211 23.59 temperature 20.0 720 < th dose independent sin 15 NA
240 23.65 humidity 50.0 14400 > th dose independent rect. 19 5
245 23.66 temperature 20.0 720 < th dose dependent rect. 21 2
269 23.71 temperature 20.0 720 < th dose independent rect. 12 18
273 23.72 humidity 50.0 14400 > th dose independent rect. 24 9
279 23.73 temperature 20.0 270 < th dose independent rect. 19 14
280 23.74 temperature 20.0 720 > th dose independent rect. 20 1
283 23.74 humidity 50.0 14400 > th dose independent rect. 19 10
293 23.75 wind 5.0 90 < th dose independent rect. 22 10
295 23.75 temperature 20.0 270 < th dose dependent rect. 21 11
296 23.75 temperature 15.0 10 > th dose dependent rect. 20 18
317 23.78 temperature 20.0 720 < th dose independent rect. 15 14
320 23.78 temperature 20.0 720 > th dose independent rect. 9 20
334 23.81 humidity 70.0 14400 < th dose independent rect. 21 1
346 23.81 temperature 20.0 720 > th dose independent rect. 11 18
351 23.81 temperature 15.0 270 > th dose dependent rect. 17 19
408 23.88 radiation 20.0 270 < th dose dependent rect. 16 12
413 23.89 wind 9.0 1440 < th dose independent rect. 24 9
424 23.90 radiation 10.0 270 < th dose independent rect. 16 12
429 23.90 temperature 20.0 270 < th dose dependent sin 10 NA
490 23.96 wind 1.0 720 > th dose independent rect. 13 12
495 23.96 humidity 70.0 14400 < th dose dependent rect. 20 11
500 23.97 precipitation 0.1 90 < th dose independent rect. 22 10
502 23.97 temperature 30.0 90 < th dose independent rect. 22 11
508 23.97 precipitation 0.1 90 < th dose dependent rect. 22 10
519 23.99 temperature 20.0 270 < th dose independent sin 10 NA
536 24.00 atmosphere 995.0 90 > th dose independent rect. 8 14
550 24.01 wind 1.0 1440 > th dose independent rect. 23 1
553 24.01 wind 7.0 10 < th dose independent rect. 23 10
579 24.03 temperature 10.0 90 > th dose independent rect. 22 10
581 24.03 humidity 50.0 90 > th dose independent rect. 22 10
583 24.03 atmosphere 995.0 90 > th dose independent rect. 22 10
584 24.03 atmosphere 1015.0 270 < th dose independent rect. 8 13
602 24.04 radiation 40.0 90 < th dose independent rect. 22 10
609 24.04 temperature 20.0 720 < th dose dependent sin 15 NA
625 24.05 radiation 40.0 90 < th dose independent rect. 22 21
645 24.07 atmosphere 995.0 10 > th dose independent rect. 9 14
654 24.09 wind 1.0 720 < th dose independent rect. 23 1
657 24.09 precipitation 0.1 10 < th dose independent rect. 23 10
661 24.09 radiation 30.0 720 < th dose dependent rect. 16 5
662 24.09 precipitation 0.1 10 < th dose dependent rect. 23 10
673 24.10 precipitation 0.1 90 < th dose independent rect. 21 23
676 24.10 precipitation 0.1 90 < th dose dependent rect. 21 23
677 24.11 humidity 70.0 270 > th dose independent rect. 18 2
681 24.11 temperature 10.0 10 > th dose independent rect. 23 10
682 24.11 temperature 30.0 10 < th dose independent rect. 23 10
683 24.11 humidity 50.0 10 > th dose independent rect. 23 10
685 24.11 atmosphere 995.0 10 > th dose independent rect. 23 10
686 24.11 temperature 10.0 10 > th dose independent rect. 9 14
688 24.11 atmosphere 1015.0 10 < th dose independent rect. 9 14
700 24.11 temperature 20.0 720 < th dose independent rect. 4 21
703 24.11 humidity 70.0 10 > th dose dependent rect. 18 5
712 24.12 humidity 50.0 10 > th dose independent rect. 9 14
728 24.13 temperature 20.0 720 > th dose independent rect. 1 1
769 24.14 wind 9.0 90 < th dose independent rect. 8 14
811 24.16 atmosphere 1005.0 720 < th dose independent sin 15 NA
845 24.17 humidity 50.0 270 > th dose independent rect. 17 11
872 24.18 atmosphere 995.0 270 > th dose independent rect. 17 11
875 24.18 precipitation 0.1 270 < th dose independent rect. 4 13
883 24.18 temperature 20.0 1440 < th dose independent rect. 24 19
894 24.18 temperature 20.0 90 > th dose independent rect. 20 22
903 24.18 precipitation 0.1 270 < th dose dependent rect. 4 13
907 24.19 humidity 70.0 14400 > th dose independent rect. 21 1
934 24.19 temperature 20.0 1440 > th dose independent rect. 24 19
965 24.20 temperature 20.0 1440 < th dose independent no NA NA
970 24.20 radiation 40.0 10 < th dose independent rect. 23 10
972 24.20 temperature 30.0 270 < th dose independent rect. 17 11
976 24.20 temperature 20.0 1440 > th dose independent rect. 1 17