Os01g0341200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0341200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.74 | 0.525 | 9.1 | 1.47 | 0.313 | -1.39 | 0.457 | -1.88 | 0.777 | 6.33 | 77.03 | 1239 | -- | -- |
| 128.13 | 0.527 | 9.08 | 1.62 | 0.311 | -1.49 | 0.402 | -- | 0.815 | 6.35 | 77.57 | 1250 | -- | -- |
| 125.2 | 0.521 | 9.1 | 1.47 | 0.306 | -1.35 | -- | -1.93 | 0.787 | 6.3 | 76.86 | 1236 | -- | -- |
| 128.55 | 0.528 | 9.08 | 1.64 | 0.322 | -1.5 | -- | -- | 0.815 | 6.5 | 77.83 | 1251 | -- | -- |
| 128.19 | 0.527 | 9.11 | 1.48 | -- | -1.22 | -- | -1.97 | 0.789 | -- | 76 | 1100 | -- | -- |
| 157.54 | 0.588 | 9.1 | 1.52 | 0.336 | -- | 0.478 | -- | 0.74 | 9.03 | -- | -- | -- | -- |
| 158.33 | 0.589 | 9.1 | 1.53 | 0.334 | -- | -- | -- | 0.74 | 9.01 | -- | -- | -- | -- |
| 132.83 | 0.537 | 9.09 | 1.64 | -- | -1.28 | -- | -- | 0.807 | -- | 77.12 | 1086 | -- | -- |
| 191.21 | 0.644 | 9.14 | -- | 0.349 | -1.47 | -- | -- | 0.801 | 9.15 | 86 | 1556 | -- | -- |
| 164.75 | 0.6 | 9.11 | 1.53 | -- | -- | -- | -- | 0.742 | -- | -- | -- | -- | -- |
| 220.21 | 0.694 | 9.14 | -- | 0.338 | -- | -- | -- | 0.569 | 8.66 | -- | -- | -- | -- |
| 189.21 | 0.641 | 9.07 | -- | -- | -1.53 | -- | -- | 0.915 | -- | 86 | 2162 | -- | -- |
| 226.64 | 0.703 | 9.15 | -- | -- | -- | -- | -- | 0.572 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.32 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 2 | 119.39 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 21 | 119.96 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 22 | 119.97 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 39 | 122.07 | radiation | 30 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 56 | 122.34 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 59 | 123.28 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 94 | 124.57 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 99 | 124.75 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 7 |
| 109 | 125.07 | radiation | 40 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 139 | 125.61 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 151 | 125.84 | humidity | 50 | 270 | > th | dose dependent | rect. | 16 | 9 |
| 159 | 125.87 | humidity | 50 | 720 | > th | dose dependent | sin | 13 | NA |
| 160 | 125.88 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 164 | 125.90 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 219 | 126.32 | humidity | 80 | 43200 | > th | dose independent | sin | 3 | NA |
| 240 | 126.40 | wind | 5 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 292 | 126.64 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 293 | 126.64 | humidity | 80 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 295 | 126.65 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 321 | 126.76 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 323 | 126.77 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 333 | 126.83 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 373 | 126.91 | humidity | 80 | 43200 | < th | dose independent | sin | 3 | NA |
| 391 | 127.03 | wind | 1 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 407 | 127.14 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 411 | 127.18 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 416 | 127.21 | radiation | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 437 | 127.24 | radiation | 40 | 1440 | > th | dose dependent | sin | 13 | NA |
| 458 | 127.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 490 | 127.45 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 13 |
| 496 | 127.50 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 504 | 127.54 | humidity | 60 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 527 | 127.67 | humidity | 80 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 548 | 127.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 551 | 127.73 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 587 | 127.83 | humidity | 70 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 601 | 127.87 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 607 | 127.89 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 650 | 127.95 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 662 | 127.99 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 665 | 127.99 | humidity | 70 | 43200 | > th | dose dependent | sin | 4 | NA |
| 722 | 128.09 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 748 | 128.13 | humidity | 70 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 756 | 128.16 | humidity | 90 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 779 | 128.20 | humidity | 80 | 43200 | > th | dose independent | rect. | 1 | 20 |
| 836 | 128.26 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 945 | 128.30 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 988 | 128.31 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 19 |
| 994 | 128.32 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 16 |