Os01g0338100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0338100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.55 | 0.466 | 9.01 | 1.89 | 0.622 | -1.7 | -0.614 | 1.22 | 0.207 | 6.87 | 15.03 | 1369 | -- | -- |
| 99.34 | 0.464 | 9.05 | 1.7 | 0.563 | -1.59 | -0.638 | -- | 0.149 | 6.38 | 12.75 | 2485 | -- | -- |
| 99.46 | 0.464 | 9.01 | 1.89 | 0.624 | -1.69 | -- | 1.19 | 0.209 | 7.16 | 15.03 | 1425 | -- | -- |
| 100.36 | 0.467 | 9.04 | 1.69 | 0.597 | -1.57 | -- | -- | 0.148 | 6.65 | 11.89 | 2622 | -- | -- |
| 101.26 | 0.469 | 9.01 | 1.94 | -- | -1.95 | -- | 2 | 0.238 | -- | 16.08 | 618 | -- | -- |
| 149.09 | 0.572 | 9.12 | 1.08 | 0.586 | -- | -0.426 | -- | -0.175 | 7.59 | -- | -- | -- | -- |
| 149.57 | 0.573 | 9.11 | 1.07 | 0.584 | -- | -- | -- | -0.174 | 7.73 | -- | -- | -- | -- |
| 103.53 | 0.474 | 9.06 | 1.58 | -- | -2.04 | -- | -- | 0.139 | -- | 13.93 | 659 | -- | -- |
| 156.51 | 0.583 | 9.12 | -- | 0.608 | -0.767 | -- | -- | -0.157 | 7.27 | 21.98 | 1404 | -- | -- |
| 168.01 | 0.606 | 9.13 | 1.08 | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
| 179.99 | 0.628 | 9.14 | -- | 0.593 | -- | -- | -- | -0.293 | 7.6 | -- | -- | -- | -- |
| 161.06 | 0.591 | 9.12 | -- | -- | -1.19 | -- | -- | -0.109 | -- | 19.98 | 619 | -- | -- |
| 198.87 | 0.658 | 9.16 | -- | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.92 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 88.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 5 | 89.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 7 | 89.58 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 15 | 91.08 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 20 | 91.38 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 26 | 92.03 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 30 | 92.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 35 | 92.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 39 | 93.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 43 | 93.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 45 | 93.31 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 47 | 93.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 56 | 93.68 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 63 | 93.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 71 | 94.13 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 82 | 94.58 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 97 | 95.33 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 105 | 95.51 | wind | 9.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 107 | 95.55 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 148 | 96.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 154 | 96.61 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 156 | 96.64 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 184 | 97.10 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 233 | 97.41 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 259 | 97.56 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 298 | 97.75 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 346 | 98.02 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 353 | 98.05 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 354 | 98.05 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 362 | 98.09 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 363 | 98.11 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 381 | 98.19 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 391 | 98.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 429 | 98.37 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 446 | 98.45 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 6 | 21 |
| 460 | 98.48 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 511 | 98.55 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 22 |
| 536 | 98.58 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 545 | 98.59 | temperature | 15.0 | 1440 | > th | dose dependent | no | NA | NA |
| 587 | 98.65 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 640 | 98.71 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 849 | 98.99 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 18 |